Protein–RNA interactions for Protein: P50747

HLCS, Biotin--protein ligase, humanhuman

Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLCSP50747 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLCSP50747 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLCSP50747 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLCSP50747 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLCSP50747 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLCSP50747 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
HLCSP50747 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HLCSP50747 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.86■□□□□ 0.93
HLCSP50747 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HLCSP50747 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HLCSP50747 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HLCSP50747 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.85■□□□□ 0.93
HLCSP50747 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.85■□□□□ 0.93
HLCSP50747 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.85■□□□□ 0.93
HLCSP50747 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.85■□□□□ 0.93
HLCSP50747 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLCSP50747 AC135279.3-201ENST00000610945 1311 ntBASIC20.84■□□□□ 0.93
HLCSP50747 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HLCSP50747 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
HLCSP50747 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HLCSP50747 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.84■□□□□ 0.93
HLCSP50747 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.84■□□□□ 0.93
HLCSP50747 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HLCSP50747 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.84■□□□□ 0.93
HLCSP50747 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.84■□□□□ 0.93
HLCSP50747 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
HLCSP50747 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HLCSP50747 C17orf82-201ENST00000623772 1530 ntBASIC20.83■□□□□ 0.93
HLCSP50747 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
HLCSP50747 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.83■□□□□ 0.93
HLCSP50747 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.83■□□□□ 0.93
HLCSP50747 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.83■□□□□ 0.93
HLCSP50747 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.83■□□□□ 0.93
HLCSP50747 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HLCSP50747 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
HLCSP50747 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.83■□□□□ 0.92
HLCSP50747 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
HLCSP50747 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
HLCSP50747 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
HLCSP50747 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
HLCSP50747 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HLCSP50747 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLCSP50747 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLCSP50747 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLCSP50747 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.82■□□□□ 0.92
HLCSP50747 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HLCSP50747 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLCSP50747 SYT6-210ENST00000641643 1587 ntBASIC20.82■□□□□ 0.92
HLCSP50747 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.82■□□□□ 0.92
HLCSP50747 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.82■□□□□ 0.92
HLCSP50747 AC099791.2-201ENST00000605725 427 ntBASIC20.82■□□□□ 0.92
HLCSP50747 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HLCSP50747 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLCSP50747 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HLCSP50747 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.81■□□□□ 0.92
HLCSP50747 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLCSP50747 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLCSP50747 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLCSP50747 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.81■□□□□ 0.92
HLCSP50747 AC024257.2-201ENST00000549699 147 ntBASIC20.81■□□□□ 0.92
HLCSP50747 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HLCSP50747 AC241377.3-202ENST00000626088 1088 ntBASIC20.81■□□□□ 0.92
HLCSP50747 AC241585.3-202ENST00000628937 1088 ntBASIC20.81■□□□□ 0.92
HLCSP50747 AC245100.8-202ENST00000629247 1058 ntBASIC20.81■□□□□ 0.92
HLCSP50747 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HLCSP50747 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLCSP50747 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.81■□□□□ 0.92
HLCSP50747 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
HLCSP50747 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
HLCSP50747 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLCSP50747 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HLCSP50747 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.81■□□□□ 0.92
HLCSP50747 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
HLCSP50747 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLCSP50747 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.8■□□□□ 0.92
HLCSP50747 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLCSP50747 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLCSP50747 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
HLCSP50747 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HLCSP50747 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
HLCSP50747 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.8■□□□□ 0.92
HLCSP50747 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLCSP50747 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLCSP50747 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLCSP50747 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HLCSP50747 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.79■□□□□ 0.92
HLCSP50747 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
HLCSP50747 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLCSP50747 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HLCSP50747 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.79■□□□□ 0.92
HLCSP50747 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.79■□□□□ 0.92
HLCSP50747 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
HLCSP50747 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.79■□□□□ 0.92
HLCSP50747 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.79■□□□□ 0.92
HLCSP50747 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLCSP50747 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HLCSP50747 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HLCSP50747 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HLCSP50747 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HLCSP50747 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms