Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 OR2I1P-207ENST00000453522 948 ntBASIC23.13■■□□□ 1.29
MMP8P22894 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.13■■□□□ 1.29
MMP8P22894 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
MMP8P22894 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.13■■□□□ 1.29
MMP8P22894 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.13■■□□□ 1.29
MMP8P22894 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
MMP8P22894 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
MMP8P22894 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.13■■□□□ 1.29
MMP8P22894 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
MMP8P22894 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.12■■□□□ 1.29
MMP8P22894 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.12■■□□□ 1.29
MMP8P22894 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
MMP8P22894 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
MMP8P22894 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MMP8P22894 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MMP8P22894 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.12■■□□□ 1.29
MMP8P22894 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.12■■□□□ 1.29
MMP8P22894 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC23.12■■□□□ 1.29
MMP8P22894 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
MMP8P22894 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.12■■□□□ 1.29
MMP8P22894 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC23.12■■□□□ 1.29
MMP8P22894 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.12■■□□□ 1.29
MMP8P22894 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
MMP8P22894 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC23.12■■□□□ 1.29
MMP8P22894 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MMP8P22894 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MMP8P22894 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC23.11■■□□□ 1.29
MMP8P22894 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
MMP8P22894 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MMP8P22894 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MMP8P22894 STK25-234ENST00000535007 2459 ntTSL 2 BASIC23.11■■□□□ 1.29
MMP8P22894 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MMP8P22894 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
MMP8P22894 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MMP8P22894 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC23.11■■□□□ 1.29
MMP8P22894 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.11■■□□□ 1.29
MMP8P22894 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
MMP8P22894 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
MMP8P22894 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
MMP8P22894 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MMP8P22894 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.1■■□□□ 1.29
MMP8P22894 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MMP8P22894 AC011298.3-201ENST00000615796 283 ntBASIC23.1■■□□□ 1.29
MMP8P22894 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MMP8P22894 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC23.1■■□□□ 1.29
MMP8P22894 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC23.1■■□□□ 1.29
MMP8P22894 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
MMP8P22894 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
MMP8P22894 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MMP8P22894 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
MMP8P22894 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
MMP8P22894 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
MMP8P22894 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
MMP8P22894 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
MMP8P22894 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
MMP8P22894 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
MMP8P22894 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
MMP8P22894 AC136469.2-201ENST00000623944 1028 ntBASIC23.09■■□□□ 1.29
MMP8P22894 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
MMP8P22894 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
MMP8P22894 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC23.09■■□□□ 1.29
MMP8P22894 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
MMP8P22894 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
MMP8P22894 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
MMP8P22894 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
MMP8P22894 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
MMP8P22894 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC23.08■■□□□ 1.29
MMP8P22894 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
MMP8P22894 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
MMP8P22894 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC23.07■■□□□ 1.28
MMP8P22894 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
MMP8P22894 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
MMP8P22894 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MMP8P22894 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
MMP8P22894 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.07■■□□□ 1.28
MMP8P22894 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC23.07■■□□□ 1.28
MMP8P22894 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
MMP8P22894 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
MMP8P22894 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.07■■□□□ 1.28
MMP8P22894 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
MMP8P22894 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.06■■□□□ 1.28
MMP8P22894 AC092053.2-201ENST00000640557 1818 ntBASIC23.06■■□□□ 1.28
MMP8P22894 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
MMP8P22894 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
MMP8P22894 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.06■■□□□ 1.28
MMP8P22894 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.06■■□□□ 1.28
MMP8P22894 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
MMP8P22894 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
MMP8P22894 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
MMP8P22894 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
MMP8P22894 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.06■■□□□ 1.28
MMP8P22894 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC23.06■■□□□ 1.28
MMP8P22894 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MMP8P22894 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC23.05■■□□□ 1.28
MMP8P22894 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.05■■□□□ 1.28
MMP8P22894 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
MMP8P22894 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MMP8P22894 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
MMP8P22894 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
MMP8P22894 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms