Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NFKB1P19838 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.3■■□□□ 1.16
NFKB1P19838 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.3■■□□□ 1.16
NFKB1P19838 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC22.3■■□□□ 1.16
NFKB1P19838 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
NFKB1P19838 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
NFKB1P19838 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.3■■□□□ 1.16
NFKB1P19838 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
NFKB1P19838 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NFKB1P19838 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
NFKB1P19838 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
NFKB1P19838 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.3■■□□□ 1.16
NFKB1P19838 SYT6-210ENST00000641643 1587 ntBASIC22.29■■□□□ 1.16
NFKB1P19838 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NFKB1P19838 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NFKB1P19838 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
NFKB1P19838 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
NFKB1P19838 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
NFKB1P19838 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
NFKB1P19838 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
NFKB1P19838 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
NFKB1P19838 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NFKB1P19838 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC22.29■■□□□ 1.16
NFKB1P19838 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.29■■□□□ 1.16
NFKB1P19838 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
NFKB1P19838 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC22.29■■□□□ 1.16
NFKB1P19838 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
NFKB1P19838 AC139530.1-201ENST00000575312 1977 ntBASIC22.29■■□□□ 1.16
NFKB1P19838 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NFKB1P19838 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NFKB1P19838 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
NFKB1P19838 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NFKB1P19838 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NFKB1P19838 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NFKB1P19838 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NFKB1P19838 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
NFKB1P19838 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.28■■□□□ 1.16
NFKB1P19838 STK25-234ENST00000535007 2459 ntTSL 2 BASIC22.28■■□□□ 1.16
NFKB1P19838 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
NFKB1P19838 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
NFKB1P19838 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
NFKB1P19838 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NFKB1P19838 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
NFKB1P19838 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NFKB1P19838 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.27■■□□□ 1.16
NFKB1P19838 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NFKB1P19838 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.27■■□□□ 1.16
NFKB1P19838 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NFKB1P19838 HES6-206ENST00000409574 738 ntTSL 2 BASIC22.27■■□□□ 1.16
NFKB1P19838 DUX4L19-201ENST00000557448 1267 ntBASIC22.27■■□□□ 1.16
NFKB1P19838 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
NFKB1P19838 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
NFKB1P19838 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC22.27■■□□□ 1.16
NFKB1P19838 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC22.27■■□□□ 1.15
NFKB1P19838 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.15
NFKB1P19838 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
NFKB1P19838 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC22.26■■□□□ 1.15
NFKB1P19838 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.26■■□□□ 1.15
NFKB1P19838 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
NFKB1P19838 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NFKB1P19838 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
NFKB1P19838 AC137767.1-201ENST00000602918 1920 ntBASIC22.26■■□□□ 1.15
NFKB1P19838 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NFKB1P19838 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
NFKB1P19838 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NFKB1P19838 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC22.26■■□□□ 1.15
NFKB1P19838 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.26■■□□□ 1.15
NFKB1P19838 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
NFKB1P19838 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.26■■□□□ 1.15
NFKB1P19838 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NFKB1P19838 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NFKB1P19838 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NFKB1P19838 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC22.25■■□□□ 1.15
NFKB1P19838 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NFKB1P19838 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.25■■□□□ 1.15
NFKB1P19838 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NFKB1P19838 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
NFKB1P19838 AL138724.1-201ENST00000606771 1088 ntBASIC22.25■■□□□ 1.15
NFKB1P19838 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.25■■□□□ 1.15
NFKB1P19838 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NFKB1P19838 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.25■■□□□ 1.15
NFKB1P19838 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
NFKB1P19838 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.25■■□□□ 1.15
NFKB1P19838 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.24■■□□□ 1.15
NFKB1P19838 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NFKB1P19838 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NFKB1P19838 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
NFKB1P19838 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NFKB1P19838 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NFKB1P19838 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NFKB1P19838 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.24■■□□□ 1.15
NFKB1P19838 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NFKB1P19838 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
NFKB1P19838 OR2I1P-207ENST00000453522 948 ntBASIC22.24■■□□□ 1.15
NFKB1P19838 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC22.24■■□□□ 1.15
NFKB1P19838 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.24■■□□□ 1.15
NFKB1P19838 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
NFKB1P19838 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.24■■□□□ 1.15
NFKB1P19838 CA15P2-201ENST00000611168 834 ntBASIC22.24■■□□□ 1.15
NFKB1P19838 AL031602.1-201ENST00000633169 911 ntBASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms