Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
THRAP10827 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.87■■□□□ 1.09
THRAP10827 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.87■■□□□ 1.09
THRAP10827 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.87■■□□□ 1.09
THRAP10827 C17orf82-201ENST00000623772 1530 ntBASIC21.87■■□□□ 1.09
THRAP10827 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
THRAP10827 MIR939-201ENST00000401314 82 ntBASIC21.87■■□□□ 1.09
THRAP10827 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
THRAP10827 AP001330.3-201ENST00000520123 633 ntBASIC21.87■■□□□ 1.09
THRAP10827 MIR4767-201ENST00000582827 78 ntBASIC21.87■■□□□ 1.09
THRAP10827 AL136967.2-201ENST00000623968 743 ntBASIC21.87■■□□□ 1.09
THRAP10827 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
THRAP10827 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
THRAP10827 PKD1P6-201ENST00000343738 4769 ntBASIC21.87■■□□□ 1.09
THRAP10827 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
THRAP10827 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
THRAP10827 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.86■■□□□ 1.09
THRAP10827 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
THRAP10827 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.86■■□□□ 1.09
THRAP10827 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.86■■□□□ 1.09
THRAP10827 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.86■■□□□ 1.09
THRAP10827 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
THRAP10827 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.86■■□□□ 1.09
THRAP10827 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC21.86■■□□□ 1.09
THRAP10827 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC21.86■■□□□ 1.09
THRAP10827 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
THRAP10827 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
THRAP10827 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
THRAP10827 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
THRAP10827 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
THRAP10827 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
THRAP10827 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
THRAP10827 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.85■■□□□ 1.09
THRAP10827 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
THRAP10827 AL138724.1-201ENST00000606771 1088 ntBASIC21.85■■□□□ 1.09
THRAP10827 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
THRAP10827 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.85■■□□□ 1.09
THRAP10827 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
THRAP10827 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.85■■□□□ 1.09
THRAP10827 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
THRAP10827 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
THRAP10827 ESRRAP2-201ENST00000418437 1549 ntBASIC21.85■■□□□ 1.09
THRAP10827 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.85■■□□□ 1.09
THRAP10827 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
THRAP10827 AC242852.2-201ENST00000615738 1807 ntBASIC21.85■■□□□ 1.09
THRAP10827 AL024507.2-201ENST00000606070 2574 ntBASIC21.85■■□□□ 1.09
THRAP10827 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.84■■□□□ 1.09
THRAP10827 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
THRAP10827 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
THRAP10827 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
THRAP10827 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
THRAP10827 AC105265.2-201ENST00000467189 838 ntBASIC21.84■■□□□ 1.09
THRAP10827 RARRES2P6-201ENST00000567333 442 ntBASIC21.84■■□□□ 1.09
THRAP10827 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
THRAP10827 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
THRAP10827 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
THRAP10827 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
THRAP10827 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
THRAP10827 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.83■■□□□ 1.09
THRAP10827 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
THRAP10827 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.83■■□□□ 1.09
THRAP10827 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.83■■□□□ 1.09
THRAP10827 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
THRAP10827 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
THRAP10827 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.83■■□□□ 1.09
THRAP10827 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
THRAP10827 AC011298.3-201ENST00000615796 283 ntBASIC21.83■■□□□ 1.09
THRAP10827 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
THRAP10827 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
THRAP10827 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.83■■□□□ 1.08
THRAP10827 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
THRAP10827 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
THRAP10827 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
THRAP10827 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
THRAP10827 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
THRAP10827 AC091305.1-201ENST00000479476 895 ntBASIC21.82■■□□□ 1.08
THRAP10827 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC21.82■■□□□ 1.08
THRAP10827 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.82■■□□□ 1.08
THRAP10827 AC241377.3-202ENST00000626088 1088 ntBASIC21.82■■□□□ 1.08
THRAP10827 AC241585.3-202ENST00000628937 1088 ntBASIC21.82■■□□□ 1.08
THRAP10827 AC245100.8-202ENST00000629247 1058 ntBASIC21.82■■□□□ 1.08
THRAP10827 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
THRAP10827 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
THRAP10827 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
THRAP10827 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
THRAP10827 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
THRAP10827 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
THRAP10827 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
THRAP10827 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.81■■□□□ 1.08
THRAP10827 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
THRAP10827 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.81■■□□□ 1.08
THRAP10827 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.81■■□□□ 1.08
THRAP10827 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
THRAP10827 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
THRAP10827 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.81■■□□□ 1.08
THRAP10827 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
THRAP10827 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.8■■□□□ 1.08
THRAP10827 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.8■■□□□ 1.08
THRAP10827 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
THRAP10827 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms