Protein–RNA interactions for Protein: P10720

PF4V1, Platelet factor 4 variant, humanhuman

Predictions only

Length 104 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1P10720 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PF4V1P10720 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.29■□□□□ 0.36
PF4V1P10720 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.29■□□□□ 0.36
PF4V1P10720 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PF4V1P10720 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.29■□□□□ 0.36
PF4V1P10720 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PF4V1P10720 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
PF4V1P10720 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PF4V1P10720 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
PF4V1P10720 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PF4V1P10720 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.28■□□□□ 0.36
PF4V1P10720 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PF4V1P10720 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.28■□□□□ 0.36
PF4V1P10720 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PF4V1P10720 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.28■□□□□ 0.36
PF4V1P10720 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.28■□□□□ 0.36
PF4V1P10720 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PF4V1P10720 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.28■□□□□ 0.36
PF4V1P10720 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PF4V1P10720 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.28■□□□□ 0.36
PF4V1P10720 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.28■□□□□ 0.36
PF4V1P10720 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.28■□□□□ 0.36
PF4V1P10720 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PF4V1P10720 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.28■□□□□ 0.36
PF4V1P10720 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.28■□□□□ 0.36
PF4V1P10720 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PF4V1P10720 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PF4V1P10720 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.28■□□□□ 0.36
PF4V1P10720 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PF4V1P10720 TSPY26P-201ENST00000476365 1326 ntBASIC17.27■□□□□ 0.36
PF4V1P10720 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC17.27■□□□□ 0.36
PF4V1P10720 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.27■□□□□ 0.36
PF4V1P10720 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
PF4V1P10720 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.27■□□□□ 0.36
PF4V1P10720 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.27■□□□□ 0.36
PF4V1P10720 JTB-203ENST00000368589 1216 ntTSL 2 BASIC17.27■□□□□ 0.36
PF4V1P10720 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.27■□□□□ 0.36
PF4V1P10720 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
PF4V1P10720 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC17.27■□□□□ 0.35
PF4V1P10720 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PF4V1P10720 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PF4V1P10720 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PF4V1P10720 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
PF4V1P10720 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PF4V1P10720 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PF4V1P10720 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PF4V1P10720 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PF4V1P10720 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.26■□□□□ 0.35
PF4V1P10720 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PF4V1P10720 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PF4V1P10720 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PF4V1P10720 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.26■□□□□ 0.35
PF4V1P10720 NFE2L3P1-201ENST00000588207 1959 ntBASIC17.26■□□□□ 0.35
PF4V1P10720 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
PF4V1P10720 AL162430.1-201ENST00000480705 870 ntBASIC17.26■□□□□ 0.35
PF4V1P10720 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.26■□□□□ 0.35
PF4V1P10720 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
PF4V1P10720 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.26■□□□□ 0.35
PF4V1P10720 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PF4V1P10720 DUSP8P5-201ENST00000422884 1815 ntBASIC17.26■□□□□ 0.35
PF4V1P10720 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PF4V1P10720 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PF4V1P10720 DUSP8P3-201ENST00000399571 1760 ntBASIC17.25■□□□□ 0.35
PF4V1P10720 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PF4V1P10720 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PF4V1P10720 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
PF4V1P10720 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.25■□□□□ 0.35
PF4V1P10720 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PF4V1P10720 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PF4V1P10720 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.25■□□□□ 0.35
PF4V1P10720 SLC47A1P1-202ENST00000449666 945 ntBASIC17.25■□□□□ 0.35
PF4V1P10720 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.25■□□□□ 0.35
PF4V1P10720 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.25■□□□□ 0.35
PF4V1P10720 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PF4V1P10720 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
PF4V1P10720 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC17.25■□□□□ 0.35
PF4V1P10720 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PF4V1P10720 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.24■□□□□ 0.35
PF4V1P10720 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
PF4V1P10720 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.24■□□□□ 0.35
PF4V1P10720 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC17.24■□□□□ 0.35
PF4V1P10720 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.24■□□□□ 0.35
PF4V1P10720 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
PF4V1P10720 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
PF4V1P10720 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
PF4V1P10720 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
PF4V1P10720 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
PF4V1P10720 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
PF4V1P10720 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.23■□□□□ 0.35
PF4V1P10720 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PF4V1P10720 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
PF4V1P10720 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.23■□□□□ 0.35
PF4V1P10720 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PF4V1P10720 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
PF4V1P10720 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC17.23■□□□□ 0.35
PF4V1P10720 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
PF4V1P10720 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
PF4V1P10720 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
PF4V1P10720 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
PF4V1P10720 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms