Protein–RNA interactions for Protein: P0C7M3

SFTA3, Surfactant-associated protein 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTA3P0C7M3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SFTA3P0C7M3 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SFTA3P0C7M3 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SFTA3P0C7M3 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SFTA3P0C7M3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.48■□□□□ 0.39
SFTA3P0C7M3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SFTA3P0C7M3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
SFTA3P0C7M3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SFTA3P0C7M3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
SFTA3P0C7M3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SFTA3P0C7M3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SFTA3P0C7M3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SFTA3P0C7M3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.47■□□□□ 0.39
SFTA3P0C7M3 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC17.47■□□□□ 0.39
SFTA3P0C7M3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SFTA3P0C7M3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SFTA3P0C7M3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SFTA3P0C7M3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SFTA3P0C7M3 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SFTA3P0C7M3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
SFTA3P0C7M3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SFTA3P0C7M3 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
SFTA3P0C7M3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.46■□□□□ 0.39
SFTA3P0C7M3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SFTA3P0C7M3 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SFTA3P0C7M3 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SFTA3P0C7M3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC17.46■□□□□ 0.39
SFTA3P0C7M3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.46■□□□□ 0.39
SFTA3P0C7M3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
SFTA3P0C7M3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
SFTA3P0C7M3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.46■□□□□ 0.39
SFTA3P0C7M3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.46■□□□□ 0.39
SFTA3P0C7M3 LINC01006-201ENST00000333319 2292 ntBASIC17.46■□□□□ 0.39
SFTA3P0C7M3 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
SFTA3P0C7M3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.46■□□□□ 0.38
SFTA3P0C7M3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
SFTA3P0C7M3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SFTA3P0C7M3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
SFTA3P0C7M3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SFTA3P0C7M3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms