Protein–RNA interactions for Protein: P08865

RPSA, 40S ribosomal protein SA, humanhuman

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPSAP08865 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPSAP08865 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.05■□□□□ 0.96
RPSAP08865 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
RPSAP08865 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPSAP08865 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RPSAP08865 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPSAP08865 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.05■□□□□ 0.96
RPSAP08865 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPSAP08865 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RPSAP08865 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.05■□□□□ 0.96
RPSAP08865 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.05■□□□□ 0.96
RPSAP08865 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.05■□□□□ 0.96
RPSAP08865 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPSAP08865 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.04■□□□□ 0.96
RPSAP08865 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.04■□□□□ 0.96
RPSAP08865 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPSAP08865 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPSAP08865 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPSAP08865 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPSAP08865 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
RPSAP08865 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPSAP08865 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPSAP08865 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.04■□□□□ 0.96
RPSAP08865 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RPSAP08865 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPSAP08865 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.04■□□□□ 0.96
RPSAP08865 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPSAP08865 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.04■□□□□ 0.96
RPSAP08865 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPSAP08865 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
RPSAP08865 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPSAP08865 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPSAP08865 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPSAP08865 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPSAP08865 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RPSAP08865 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RPSAP08865 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPSAP08865 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.03■□□□□ 0.96
RPSAP08865 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPSAP08865 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPSAP08865 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPSAP08865 DUX4L11-201ENST00000611504 1267 ntBASIC21.03■□□□□ 0.96
RPSAP08865 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPSAP08865 DUX4L12-201ENST00000614593 1267 ntBASIC21.03■□□□□ 0.96
RPSAP08865 DUX4L14-201ENST00000621227 1267 ntBASIC21.03■□□□□ 0.96
RPSAP08865 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPSAP08865 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPSAP08865 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RPSAP08865 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPSAP08865 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RPSAP08865 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.03■□□□□ 0.96
RPSAP08865 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPSAP08865 AL359258.2-201ENST00000564063 1566 ntBASIC21.02■□□□□ 0.96
RPSAP08865 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPSAP08865 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPSAP08865 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPSAP08865 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RPSAP08865 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPSAP08865 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPSAP08865 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPSAP08865 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC21.02■□□□□ 0.96
RPSAP08865 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPSAP08865 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
RPSAP08865 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RPSAP08865 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.02■□□□□ 0.95
RPSAP08865 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
RPSAP08865 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
RPSAP08865 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPSAP08865 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.01■□□□□ 0.95
RPSAP08865 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPSAP08865 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPSAP08865 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPSAP08865 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPSAP08865 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPSAP08865 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
RPSAP08865 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPSAP08865 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC21.01■□□□□ 0.95
RPSAP08865 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPSAP08865 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC21.01■□□□□ 0.95
RPSAP08865 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC21.01■□□□□ 0.95
RPSAP08865 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPSAP08865 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPSAP08865 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPSAP08865 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPSAP08865 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21■□□□□ 0.95
RPSAP08865 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPSAP08865 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPSAP08865 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RPSAP08865 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPSAP08865 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21■□□□□ 0.95
RPSAP08865 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21■□□□□ 0.95
RPSAP08865 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPSAP08865 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPSAP08865 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPSAP08865 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
RPSAP08865 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPSAP08865 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.99■□□□□ 0.95
RPSAP08865 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPSAP08865 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RPSAP08865 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms