Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.18■□□□□ 0.82
THBS1P07996 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
THBS1P07996 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
THBS1P07996 AC137767.1-201ENST00000602918 1920 ntBASIC20.18■□□□□ 0.82
THBS1P07996 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
THBS1P07996 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
THBS1P07996 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC20.18■□□□□ 0.82
THBS1P07996 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.18■□□□□ 0.82
THBS1P07996 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
THBS1P07996 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
THBS1P07996 C11orf96-202ENST00000528572 1834 ntBASIC20.18■□□□□ 0.82
THBS1P07996 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.18■□□□□ 0.82
THBS1P07996 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
THBS1P07996 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
THBS1P07996 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
THBS1P07996 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
THBS1P07996 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.17■□□□□ 0.82
THBS1P07996 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
THBS1P07996 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.17■□□□□ 0.82
THBS1P07996 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
THBS1P07996 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
THBS1P07996 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.17■□□□□ 0.82
THBS1P07996 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
THBS1P07996 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
THBS1P07996 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
THBS1P07996 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
THBS1P07996 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
THBS1P07996 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
THBS1P07996 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
THBS1P07996 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
THBS1P07996 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
THBS1P07996 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.16■□□□□ 0.82
THBS1P07996 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC20.16■□□□□ 0.82
THBS1P07996 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.16■□□□□ 0.82
THBS1P07996 AC133637.1-201ENST00000624115 1537 ntBASIC20.16■□□□□ 0.82
THBS1P07996 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
THBS1P07996 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
THBS1P07996 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.16■□□□□ 0.82
THBS1P07996 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.16■□□□□ 0.82
THBS1P07996 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
THBS1P07996 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
THBS1P07996 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
THBS1P07996 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
THBS1P07996 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
THBS1P07996 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.15■□□□□ 0.82
THBS1P07996 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
THBS1P07996 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.15■□□□□ 0.82
THBS1P07996 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
THBS1P07996 AC006455.2-201ENST00000429931 906 ntBASIC20.15■□□□□ 0.82
THBS1P07996 AC099791.2-201ENST00000605725 427 ntBASIC20.15■□□□□ 0.82
THBS1P07996 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.15■□□□□ 0.82
THBS1P07996 AC008406.3-201ENST00000620001 1374 ntBASIC20.15■□□□□ 0.82
THBS1P07996 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
THBS1P07996 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.15■□□□□ 0.82
THBS1P07996 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.15■□□□□ 0.82
THBS1P07996 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
THBS1P07996 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
THBS1P07996 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
THBS1P07996 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
THBS1P07996 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
THBS1P07996 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.14■□□□□ 0.81
THBS1P07996 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.14■□□□□ 0.81
THBS1P07996 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.14■□□□□ 0.81
THBS1P07996 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
THBS1P07996 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.14■□□□□ 0.81
THBS1P07996 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.14■□□□□ 0.81
THBS1P07996 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
THBS1P07996 AC092171.4-201ENST00000609130 632 ntBASIC20.14■□□□□ 0.81
THBS1P07996 pRNA.6-201ENST00000610482 90 ntBASIC20.14■□□□□ 0.81
THBS1P07996 pRNA.5-201ENST00000612139 90 ntBASIC20.14■□□□□ 0.81
THBS1P07996 pRNA.11-201ENST00000618423 90 ntBASIC20.14■□□□□ 0.81
THBS1P07996 pRNA.13-201ENST00000619112 90 ntBASIC20.14■□□□□ 0.81
THBS1P07996 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.14■□□□□ 0.81
THBS1P07996 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
THBS1P07996 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
THBS1P07996 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
THBS1P07996 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
THBS1P07996 SRD5A1P1-201ENST00000442297 786 ntBASIC20.13■□□□□ 0.81
THBS1P07996 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.13■□□□□ 0.81
THBS1P07996 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.13■□□□□ 0.81
THBS1P07996 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
THBS1P07996 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
THBS1P07996 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
THBS1P07996 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.13■□□□□ 0.81
THBS1P07996 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
THBS1P07996 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
THBS1P07996 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
THBS1P07996 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.12■□□□□ 0.81
THBS1P07996 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
THBS1P07996 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
THBS1P07996 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
THBS1P07996 AL512631.2-201ENST00000604634 923 ntBASIC20.12■□□□□ 0.81
THBS1P07996 AL031602.1-201ENST00000633169 911 ntBASIC20.12■□□□□ 0.81
THBS1P07996 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
THBS1P07996 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
THBS1P07996 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
THBS1P07996 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
THBS1P07996 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.12■□□□□ 0.81
THBS1P07996 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
THBS1P07996 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms