Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
LTAP01374 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LTAP01374 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LTAP01374 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LTAP01374 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LTAP01374 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LTAP01374 MTX2-204ENST00000443241 799 ntTSL 3 BASIC16.48■□□□□ 0.23
LTAP01374 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LTAP01374 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.48■□□□□ 0.23
LTAP01374 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LTAP01374 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
LTAP01374 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LTAP01374 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.48■□□□□ 0.23
LTAP01374 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
LTAP01374 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LTAP01374 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
LTAP01374 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LTAP01374 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
LTAP01374 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LTAP01374 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LTAP01374 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC16.47■□□□□ 0.23
LTAP01374 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LTAP01374 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LTAP01374 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LTAP01374 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LTAP01374 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC16.47■□□□□ 0.23
LTAP01374 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC16.47■□□□□ 0.23
LTAP01374 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC16.47■□□□□ 0.23
LTAP01374 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.47■□□□□ 0.23
LTAP01374 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LTAP01374 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LTAP01374 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.47■□□□□ 0.23
LTAP01374 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.47■□□□□ 0.23
LTAP01374 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LTAP01374 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LTAP01374 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LTAP01374 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LTAP01374 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LTAP01374 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LTAP01374 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.46■□□□□ 0.23
LTAP01374 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LTAP01374 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LTAP01374 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LTAP01374 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LTAP01374 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
LTAP01374 MIR4281-201ENST00000580852 62 ntBASIC16.46■□□□□ 0.23
LTAP01374 AC129492.7-201ENST00000622992 756 ntBASIC16.46■□□□□ 0.23
LTAP01374 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
LTAP01374 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LTAP01374 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LTAP01374 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LTAP01374 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.46■□□□□ 0.22
LTAP01374 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
LTAP01374 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
LTAP01374 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LTAP01374 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
LTAP01374 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LTAP01374 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.45■□□□□ 0.22
LTAP01374 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC16.45■□□□□ 0.22
LTAP01374 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LTAP01374 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC16.45■□□□□ 0.22
LTAP01374 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.45■□□□□ 0.22
LTAP01374 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.45■□□□□ 0.22
LTAP01374 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LTAP01374 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LTAP01374 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LTAP01374 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
LTAP01374 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
LTAP01374 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LTAP01374 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LTAP01374 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
LTAP01374 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC16.45■□□□□ 0.22
LTAP01374 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
LTAP01374 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
LTAP01374 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LTAP01374 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC16.44■□□□□ 0.22
LTAP01374 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LTAP01374 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
LTAP01374 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTAP01374 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
LTAP01374 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTAP01374 REST-206ENST00000612429 1376 ntTSL 5 BASIC16.44■□□□□ 0.22
LTAP01374 REST-207ENST00000616975 1370 ntTSL 5 BASIC16.44■□□□□ 0.22
LTAP01374 FP325331.1-202ENST00000623531 1380 ntBASIC16.44■□□□□ 0.22
LTAP01374 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LTAP01374 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
LTAP01374 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTAP01374 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTAP01374 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LTAP01374 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LTAP01374 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTAP01374 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTAP01374 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LTAP01374 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.44■□□□□ 0.22
LTAP01374 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LTAP01374 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LTAP01374 TUB-203ENST00000534099 1759 ntTSL 2 BASIC16.43■□□□□ 0.22
LTAP01374 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LTAP01374 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LTAP01374 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms