Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TGFAP01135 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TGFAP01135 AC004854.2-201ENST00000608450 1441 ntBASIC18.07■□□□□ 0.48
TGFAP01135 AC079630.1-202ENST00000618127 1840 ntBASIC18.07■□□□□ 0.48
TGFAP01135 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TGFAP01135 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TGFAP01135 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TGFAP01135 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TGFAP01135 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
TGFAP01135 KRT19P1-201ENST00000405746 1186 ntBASIC18.07■□□□□ 0.48
TGFAP01135 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
TGFAP01135 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.07■□□□□ 0.48
TGFAP01135 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
TGFAP01135 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.07■□□□□ 0.48
TGFAP01135 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.07■□□□□ 0.48
TGFAP01135 BID-214ENST00000617586 542 ntTSL 5 BASIC18.07■□□□□ 0.48
TGFAP01135 AC073111.5-205ENST00000641717 521 ntBASIC18.07■□□□□ 0.48
TGFAP01135 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TGFAP01135 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
TGFAP01135 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TGFAP01135 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TGFAP01135 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TGFAP01135 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TGFAP01135 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
TGFAP01135 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TGFAP01135 CDCA4P2-201ENST00000441182 718 ntBASIC18.06■□□□□ 0.48
TGFAP01135 AC026185.1-201ENST00000445748 174 ntBASIC18.06■□□□□ 0.48
TGFAP01135 AC010141.3-201ENST00000456659 717 ntBASIC18.06■□□□□ 0.48
TGFAP01135 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.06■□□□□ 0.48
TGFAP01135 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.06■□□□□ 0.48
TGFAP01135 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC18.06■□□□□ 0.48
TGFAP01135 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.06■□□□□ 0.48
TGFAP01135 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TGFAP01135 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.06■□□□□ 0.48
TGFAP01135 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TGFAP01135 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TGFAP01135 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TGFAP01135 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TGFAP01135 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.05■□□□□ 0.48
TGFAP01135 TESC-206ENST00000541210 936 ntTSL 3 BASIC18.05■□□□□ 0.48
TGFAP01135 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC18.05■□□□□ 0.48
TGFAP01135 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TGFAP01135 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC18.05■□□□□ 0.48
TGFAP01135 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TGFAP01135 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.05■□□□□ 0.48
TGFAP01135 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TGFAP01135 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TGFAP01135 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TGFAP01135 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TGFAP01135 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TGFAP01135 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TGFAP01135 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
TGFAP01135 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.04■□□□□ 0.48
TGFAP01135 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TGFAP01135 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.04■□□□□ 0.48
TGFAP01135 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TGFAP01135 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TGFAP01135 AL353803.4-201ENST00000565882 1934 ntBASIC18.04■□□□□ 0.48
TGFAP01135 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TGFAP01135 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TGFAP01135 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TGFAP01135 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.03■□□□□ 0.48
TGFAP01135 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC18.03■□□□□ 0.48
TGFAP01135 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.03■□□□□ 0.48
TGFAP01135 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TGFAP01135 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
TGFAP01135 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TGFAP01135 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TGFAP01135 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TGFAP01135 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC18.03■□□□□ 0.48
TGFAP01135 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
TGFAP01135 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TGFAP01135 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.03■□□□□ 0.48
TGFAP01135 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.03■□□□□ 0.48
TGFAP01135 SMUG1P1-201ENST00000590640 811 ntBASIC18.03■□□□□ 0.48
TGFAP01135 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TGFAP01135 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TGFAP01135 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TGFAP01135 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TGFAP01135 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TGFAP01135 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TGFAP01135 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TGFAP01135 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC18.02■□□□□ 0.48
TGFAP01135 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TGFAP01135 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.02■□□□□ 0.48
TGFAP01135 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TGFAP01135 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TGFAP01135 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
TGFAP01135 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TGFAP01135 AC006970.2-201ENST00000450065 779 ntBASIC18.02■□□□□ 0.48
TGFAP01135 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TGFAP01135 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.02■□□□□ 0.48
TGFAP01135 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.02■□□□□ 0.48
TGFAP01135 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.02■□□□□ 0.48
TGFAP01135 RAP2CP1-201ENST00000605103 478 ntBASIC18.02■□□□□ 0.48
TGFAP01135 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.02■□□□□ 0.48
TGFAP01135 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.02■□□□□ 0.47
TGFAP01135 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
TGFAP01135 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.01■□□□□ 0.47
TGFAP01135 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms