Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAF4O95104 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SCAF4O95104 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.83■□□□□ 0.45
SCAF4O95104 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCAF4O95104 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SCAF4O95104 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCAF4O95104 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCAF4O95104 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SCAF4O95104 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.83■□□□□ 0.44
SCAF4O95104 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCAF4O95104 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SCAF4O95104 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.83■□□□□ 0.44
SCAF4O95104 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SCAF4O95104 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SCAF4O95104 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
SCAF4O95104 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SCAF4O95104 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SCAF4O95104 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCAF4O95104 AC131274.2-201ENST00000580697 1507 ntBASIC17.82■□□□□ 0.44
SCAF4O95104 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCAF4O95104 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCAF4O95104 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCAF4O95104 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
SCAF4O95104 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCAF4O95104 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCAF4O95104 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SCAF4O95104 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC17.82■□□□□ 0.44
SCAF4O95104 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCAF4O95104 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCAF4O95104 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCAF4O95104 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCAF4O95104 AC073130.3-201ENST00000624389 2278 ntBASIC17.82■□□□□ 0.44
SCAF4O95104 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCAF4O95104 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SCAF4O95104 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SCAF4O95104 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCAF4O95104 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCAF4O95104 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SCAF4O95104 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.81■□□□□ 0.44
SCAF4O95104 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.81■□□□□ 0.44
SCAF4O95104 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCAF4O95104 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCAF4O95104 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC17.81■□□□□ 0.44
SCAF4O95104 AC019171.1-201ENST00000601251 1056 ntBASIC17.81■□□□□ 0.44
SCAF4O95104 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCAF4O95104 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCAF4O95104 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SCAF4O95104 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCAF4O95104 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC17.81■□□□□ 0.44
SCAF4O95104 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCAF4O95104 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCAF4O95104 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCAF4O95104 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SCAF4O95104 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC17.8■□□□□ 0.44
SCAF4O95104 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCAF4O95104 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SCAF4O95104 AC079630.1-202ENST00000618127 1840 ntBASIC17.8■□□□□ 0.44
SCAF4O95104 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
SCAF4O95104 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCAF4O95104 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCAF4O95104 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCAF4O95104 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCAF4O95104 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.8■□□□□ 0.44
SCAF4O95104 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SCAF4O95104 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCAF4O95104 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SCAF4O95104 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCAF4O95104 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.8■□□□□ 0.44
SCAF4O95104 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCAF4O95104 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.8■□□□□ 0.44
SCAF4O95104 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
SCAF4O95104 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SCAF4O95104 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
SCAF4O95104 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SCAF4O95104 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.79■□□□□ 0.44
SCAF4O95104 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCAF4O95104 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCAF4O95104 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
SCAF4O95104 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCAF4O95104 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
SCAF4O95104 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCAF4O95104 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
SCAF4O95104 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
SCAF4O95104 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.79■□□□□ 0.44
SCAF4O95104 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
SCAF4O95104 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
SCAF4O95104 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.79■□□□□ 0.44
SCAF4O95104 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SCAF4O95104 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCAF4O95104 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
SCAF4O95104 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.78■□□□□ 0.44
SCAF4O95104 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
SCAF4O95104 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.78■□□□□ 0.44
SCAF4O95104 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
SCAF4O95104 AC103834.1-201ENST00000520383 144 ntBASIC17.78■□□□□ 0.44
SCAF4O95104 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC17.78■□□□□ 0.44
SCAF4O95104 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
SCAF4O95104 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
SCAF4O95104 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.78■□□□□ 0.44
SCAF4O95104 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms