Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC19.26■□□□□ 0.67
ALX3O95076 MIR935-201ENST00000401179 91 ntBASIC19.26■□□□□ 0.67
ALX3O95076 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
ALX3O95076 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALX3O95076 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ALX3O95076 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALX3O95076 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALX3O95076 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.26■□□□□ 0.67
ALX3O95076 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ALX3O95076 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ALX3O95076 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALX3O95076 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.25■□□□□ 0.67
ALX3O95076 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALX3O95076 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.25■□□□□ 0.67
ALX3O95076 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALX3O95076 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALX3O95076 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALX3O95076 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ALX3O95076 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALX3O95076 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALX3O95076 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALX3O95076 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.24■□□□□ 0.67
ALX3O95076 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALX3O95076 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALX3O95076 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.24■□□□□ 0.67
ALX3O95076 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.24■□□□□ 0.67
ALX3O95076 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.24■□□□□ 0.67
ALX3O95076 SNX5-217ENST00000606557 1087 ntBASIC19.24■□□□□ 0.67
ALX3O95076 USF2-207ENST00000595068 1612 ntTSL 5 BASIC19.24■□□□□ 0.67
ALX3O95076 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
ALX3O95076 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALX3O95076 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALX3O95076 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC19.24■□□□□ 0.67
ALX3O95076 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
ALX3O95076 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALX3O95076 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.23■□□□□ 0.67
ALX3O95076 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ALX3O95076 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.23■□□□□ 0.67
ALX3O95076 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.23■□□□□ 0.67
ALX3O95076 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ALX3O95076 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALX3O95076 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ALX3O95076 AC137630.3-201ENST00000607245 391 ntBASIC19.23■□□□□ 0.67
ALX3O95076 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
ALX3O95076 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALX3O95076 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ALX3O95076 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALX3O95076 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALX3O95076 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ALX3O95076 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
ALX3O95076 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
ALX3O95076 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.22■□□□□ 0.67
ALX3O95076 AL353803.4-201ENST00000565882 1934 ntBASIC19.22■□□□□ 0.67
ALX3O95076 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.22■□□□□ 0.67
ALX3O95076 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALX3O95076 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALX3O95076 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ALX3O95076 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALX3O95076 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALX3O95076 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALX3O95076 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ALX3O95076 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ALX3O95076 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALX3O95076 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALX3O95076 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALX3O95076 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALX3O95076 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.21■□□□□ 0.67
ALX3O95076 AC103834.1-201ENST00000520383 144 ntBASIC19.21■□□□□ 0.67
ALX3O95076 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.21■□□□□ 0.67
ALX3O95076 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC19.21■□□□□ 0.67
ALX3O95076 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ALX3O95076 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALX3O95076 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALX3O95076 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALX3O95076 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
ALX3O95076 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALX3O95076 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALX3O95076 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALX3O95076 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALX3O95076 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.2■□□□□ 0.66
ALX3O95076 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
ALX3O95076 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.2■□□□□ 0.66
ALX3O95076 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.2■□□□□ 0.66
ALX3O95076 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALX3O95076 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ALX3O95076 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALX3O95076 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC19.2■□□□□ 0.66
ALX3O95076 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ALX3O95076 AC242852.2-201ENST00000615738 1807 ntBASIC19.2■□□□□ 0.66
ALX3O95076 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ALX3O95076 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALX3O95076 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.2■□□□□ 0.66
ALX3O95076 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.2■□□□□ 0.66
ALX3O95076 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ALX3O95076 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALX3O95076 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALX3O95076 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.19■□□□□ 0.66
ALX3O95076 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALX3O95076 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.19■□□□□ 0.66
ALX3O95076 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms