Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCN1O60741 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCN1O60741 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
HCN1O60741 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HCN1O60741 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.37■□□□□ 0.85
HCN1O60741 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HCN1O60741 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCN1O60741 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
HCN1O60741 EP400NL-214ENST00000641289 2402 ntBASIC20.36■□□□□ 0.85
HCN1O60741 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HCN1O60741 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HCN1O60741 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HCN1O60741 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HCN1O60741 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
HCN1O60741 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HCN1O60741 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.36■□□□□ 0.85
HCN1O60741 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HCN1O60741 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HCN1O60741 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HCN1O60741 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HCN1O60741 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCN1O60741 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HCN1O60741 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.35■□□□□ 0.85
HCN1O60741 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCN1O60741 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HCN1O60741 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCN1O60741 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.35■□□□□ 0.85
HCN1O60741 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.35■□□□□ 0.85
HCN1O60741 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.35■□□□□ 0.85
HCN1O60741 AL136967.2-201ENST00000623968 743 ntBASIC20.35■□□□□ 0.85
HCN1O60741 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
HCN1O60741 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
HCN1O60741 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCN1O60741 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HCN1O60741 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.35■□□□□ 0.85
HCN1O60741 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCN1O60741 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.34■□□□□ 0.85
HCN1O60741 AC079630.1-202ENST00000618127 1840 ntBASIC20.34■□□□□ 0.85
HCN1O60741 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
HCN1O60741 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HCN1O60741 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCN1O60741 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCN1O60741 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCN1O60741 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCN1O60741 MIR939-201ENST00000401314 82 ntBASIC20.34■□□□□ 0.85
HCN1O60741 AP001330.3-201ENST00000520123 633 ntBASIC20.34■□□□□ 0.85
HCN1O60741 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.34■□□□□ 0.85
HCN1O60741 AF213884.3-201ENST00000563833 479 ntBASIC20.34■□□□□ 0.85
HCN1O60741 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC20.34■□□□□ 0.85
HCN1O60741 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HCN1O60741 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HCN1O60741 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCN1O60741 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
HCN1O60741 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HCN1O60741 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.34■□□□□ 0.85
HCN1O60741 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HCN1O60741 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
HCN1O60741 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
HCN1O60741 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.33■□□□□ 0.85
HCN1O60741 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HCN1O60741 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HCN1O60741 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
HCN1O60741 AC091305.1-201ENST00000479476 895 ntBASIC20.33■□□□□ 0.85
HCN1O60741 AC136469.2-201ENST00000623944 1028 ntBASIC20.33■□□□□ 0.85
HCN1O60741 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
HCN1O60741 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.33■□□□□ 0.84
HCN1O60741 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HCN1O60741 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HCN1O60741 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
HCN1O60741 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HCN1O60741 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.32■□□□□ 0.84
HCN1O60741 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
HCN1O60741 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HCN1O60741 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HCN1O60741 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.32■□□□□ 0.84
HCN1O60741 AC006455.2-201ENST00000429931 906 ntBASIC20.32■□□□□ 0.84
HCN1O60741 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HCN1O60741 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.32■□□□□ 0.84
HCN1O60741 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.32■□□□□ 0.84
HCN1O60741 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.32■□□□□ 0.84
HCN1O60741 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HCN1O60741 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HCN1O60741 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HCN1O60741 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
HCN1O60741 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HCN1O60741 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HCN1O60741 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.32■□□□□ 0.84
HCN1O60741 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HCN1O60741 AL024507.2-201ENST00000606070 2574 ntBASIC20.32■□□□□ 0.84
HCN1O60741 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HCN1O60741 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HCN1O60741 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HCN1O60741 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
HCN1O60741 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
HCN1O60741 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
HCN1O60741 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HCN1O60741 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.31■□□□□ 0.84
HCN1O60741 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HCN1O60741 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
HCN1O60741 AC027682.1-201ENST00000562846 899 ntBASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms