Protein–RNA interactions for Protein: O60568

PLOD3, Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3O60568 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.58■□□□□ 0.89
PLOD3O60568 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
PLOD3O60568 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
PLOD3O60568 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
PLOD3O60568 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
PLOD3O60568 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
PLOD3O60568 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.58■□□□□ 0.88
PLOD3O60568 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
PLOD3O60568 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PLOD3O60568 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.57■□□□□ 0.88
PLOD3O60568 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PLOD3O60568 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PLOD3O60568 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
PLOD3O60568 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.57■□□□□ 0.88
PLOD3O60568 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.57■□□□□ 0.88
PLOD3O60568 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PLOD3O60568 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
PLOD3O60568 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
PLOD3O60568 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.57■□□□□ 0.88
PLOD3O60568 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
PLOD3O60568 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PLOD3O60568 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PLOD3O60568 SYT6-210ENST00000641643 1587 ntBASIC20.56■□□□□ 0.88
PLOD3O60568 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
PLOD3O60568 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PLOD3O60568 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.56■□□□□ 0.88
PLOD3O60568 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.56■□□□□ 0.88
PLOD3O60568 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
PLOD3O60568 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
PLOD3O60568 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
PLOD3O60568 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
PLOD3O60568 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
PLOD3O60568 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
PLOD3O60568 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
PLOD3O60568 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
PLOD3O60568 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.55■□□□□ 0.88
PLOD3O60568 AC233723.2-201ENST00000623798 2106 ntBASIC20.55■□□□□ 0.88
PLOD3O60568 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
PLOD3O60568 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PLOD3O60568 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
PLOD3O60568 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.54■□□□□ 0.88
PLOD3O60568 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.54■□□□□ 0.88
PLOD3O60568 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
PLOD3O60568 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
PLOD3O60568 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
PLOD3O60568 SERBP1P1-201ENST00000396021 1160 ntBASIC20.54■□□□□ 0.88
PLOD3O60568 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
PLOD3O60568 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.54■□□□□ 0.88
PLOD3O60568 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
PLOD3O60568 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.54■□□□□ 0.88
PLOD3O60568 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
PLOD3O60568 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.54■□□□□ 0.88
PLOD3O60568 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PLOD3O60568 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
PLOD3O60568 AC087742.1-201ENST00000575880 1738 ntBASIC20.53■□□□□ 0.88
PLOD3O60568 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PLOD3O60568 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.53■□□□□ 0.88
PLOD3O60568 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PLOD3O60568 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
PLOD3O60568 LINC01960-201ENST00000563759 1884 ntBASIC20.53■□□□□ 0.88
PLOD3O60568 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.53■□□□□ 0.88
PLOD3O60568 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PLOD3O60568 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PLOD3O60568 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PLOD3O60568 AC127496.7-201ENST00000625110 1798 ntBASIC20.52■□□□□ 0.88
PLOD3O60568 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.52■□□□□ 0.88
PLOD3O60568 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PLOD3O60568 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PLOD3O60568 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
PLOD3O60568 AC011298.3-201ENST00000615796 283 ntBASIC20.52■□□□□ 0.88
PLOD3O60568 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PLOD3O60568 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PLOD3O60568 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.52■□□□□ 0.87
PLOD3O60568 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PLOD3O60568 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PLOD3O60568 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PLOD3O60568 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PLOD3O60568 AC008406.3-201ENST00000620001 1374 ntBASIC20.51■□□□□ 0.87
PLOD3O60568 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PLOD3O60568 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PLOD3O60568 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PLOD3O60568 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PLOD3O60568 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PLOD3O60568 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.51■□□□□ 0.87
PLOD3O60568 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PLOD3O60568 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.51■□□□□ 0.87
PLOD3O60568 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PLOD3O60568 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PLOD3O60568 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.5■□□□□ 0.87
PLOD3O60568 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PLOD3O60568 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PLOD3O60568 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PLOD3O60568 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PLOD3O60568 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PLOD3O60568 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.5■□□□□ 0.87
PLOD3O60568 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PLOD3O60568 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PLOD3O60568 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.5■□□□□ 0.87
PLOD3O60568 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PLOD3O60568 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms