Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CUBNO60494 DUSP8P4-201ENST00000399538 1761 ntBASIC17.71■□□□□ 0.43
CUBNO60494 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CUBNO60494 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CUBNO60494 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CUBNO60494 AL121832.2-201ENST00000610979 668 ntBASIC17.71■□□□□ 0.43
CUBNO60494 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CUBNO60494 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CUBNO60494 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CUBNO60494 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CUBNO60494 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CUBNO60494 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.71■□□□□ 0.43
CUBNO60494 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.71■□□□□ 0.43
CUBNO60494 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CUBNO60494 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC17.71■□□□□ 0.43
CUBNO60494 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
CUBNO60494 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CUBNO60494 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CUBNO60494 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.42
CUBNO60494 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CUBNO60494 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.7■□□□□ 0.42
CUBNO60494 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CUBNO60494 STX4-202ENST00000394998 1498 ntTSL 2 BASIC17.7■□□□□ 0.42
CUBNO60494 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.7■□□□□ 0.42
CUBNO60494 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.7■□□□□ 0.42
CUBNO60494 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.7■□□□□ 0.42
CUBNO60494 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CUBNO60494 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CUBNO60494 POU5F1P3-201ENST00000428824 1078 ntBASIC17.7■□□□□ 0.42
CUBNO60494 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.7■□□□□ 0.42
CUBNO60494 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.69■□□□□ 0.42
CUBNO60494 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CUBNO60494 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CUBNO60494 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CUBNO60494 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CUBNO60494 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CUBNO60494 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.69■□□□□ 0.42
CUBNO60494 AC231657.2-201ENST00000624556 255 ntBASIC17.69■□□□□ 0.42
CUBNO60494 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.69■□□□□ 0.42
CUBNO60494 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CUBNO60494 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CUBNO60494 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CUBNO60494 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CUBNO60494 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CUBNO60494 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.69■□□□□ 0.42
CUBNO60494 DUSP5P2-201ENST00000426873 1033 ntBASIC17.68■□□□□ 0.42
CUBNO60494 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.68■□□□□ 0.42
CUBNO60494 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.68■□□□□ 0.42
CUBNO60494 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.68■□□□□ 0.42
CUBNO60494 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.68■□□□□ 0.42
CUBNO60494 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CUBNO60494 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CUBNO60494 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CUBNO60494 EI24-211ENST00000534546 1544 ntTSL 2 BASIC17.68■□□□□ 0.42
CUBNO60494 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.68■□□□□ 0.42
CUBNO60494 GCSHP5-201ENST00000443090 522 ntBASIC17.68■□□□□ 0.42
CUBNO60494 SLC7A5P1-201ENST00000568957 537 ntBASIC17.68■□□□□ 0.42
CUBNO60494 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CUBNO60494 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CUBNO60494 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
CUBNO60494 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CUBNO60494 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.68■□□□□ 0.42
CUBNO60494 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CUBNO60494 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.68■□□□□ 0.42
CUBNO60494 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CUBNO60494 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.68■□□□□ 0.42
CUBNO60494 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CUBNO60494 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CUBNO60494 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CUBNO60494 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CUBNO60494 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.67■□□□□ 0.42
CUBNO60494 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CUBNO60494 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CUBNO60494 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CUBNO60494 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CUBNO60494 CBFB-203ENST00000561924 584 ntTSL 5 BASIC17.67■□□□□ 0.42
CUBNO60494 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.67■□□□□ 0.42
CUBNO60494 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CUBNO60494 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CUBNO60494 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CUBNO60494 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CUBNO60494 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CUBNO60494 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CUBNO60494 FAM201B-201ENST00000458407 597 ntBASIC17.67■□□□□ 0.42
CUBNO60494 AC005181.1-201ENST00000604782 1256 ntBASIC17.67■□□□□ 0.42
CUBNO60494 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CUBNO60494 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CUBNO60494 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CUBNO60494 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC17.66■□□□□ 0.42
CUBNO60494 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CUBNO60494 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CUBNO60494 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CUBNO60494 KRT87P-202ENST00000534226 1464 ntBASIC17.66■□□□□ 0.42
CUBNO60494 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CUBNO60494 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CUBNO60494 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CUBNO60494 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CUBNO60494 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CUBNO60494 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CUBNO60494 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms