Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
URB1O60287 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
URB1O60287 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
URB1O60287 AC007322.1-201ENST00000426983 750 ntBASIC20.73■□□□□ 0.91
URB1O60287 MIR6089-201ENST00000616698 64 ntBASIC20.73■□□□□ 0.91
URB1O60287 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
URB1O60287 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.73■□□□□ 0.91
URB1O60287 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
URB1O60287 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
URB1O60287 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
URB1O60287 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.73■□□□□ 0.91
URB1O60287 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.73■□□□□ 0.91
URB1O60287 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.72■□□□□ 0.91
URB1O60287 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
URB1O60287 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
URB1O60287 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.72■□□□□ 0.91
URB1O60287 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
URB1O60287 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
URB1O60287 AL161729.1-201ENST00000604104 1402 ntBASIC20.72■□□□□ 0.91
URB1O60287 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
URB1O60287 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.72■□□□□ 0.91
URB1O60287 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
URB1O60287 AC098934.4-201ENST00000564127 592 ntBASIC20.72■□□□□ 0.91
URB1O60287 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.72■□□□□ 0.91
URB1O60287 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
URB1O60287 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
URB1O60287 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC20.72■□□□□ 0.91
URB1O60287 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
URB1O60287 CNN2P6-201ENST00000439038 900 ntBASIC20.71■□□□□ 0.91
URB1O60287 AC133041.1-202ENST00000642053 222 ntBASIC20.71■□□□□ 0.91
URB1O60287 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
URB1O60287 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
URB1O60287 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
URB1O60287 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.71■□□□□ 0.91
URB1O60287 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
URB1O60287 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.7■□□□□ 0.9
URB1O60287 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.7■□□□□ 0.9
URB1O60287 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
URB1O60287 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
URB1O60287 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
URB1O60287 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
URB1O60287 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.7■□□□□ 0.9
URB1O60287 AC022211.4-201ENST00000625094 2161 ntBASIC20.7■□□□□ 0.9
URB1O60287 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
URB1O60287 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.69■□□□□ 0.9
URB1O60287 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
URB1O60287 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
URB1O60287 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.69■□□□□ 0.9
URB1O60287 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.69■□□□□ 0.9
URB1O60287 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.69■□□□□ 0.9
URB1O60287 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.69■□□□□ 0.9
URB1O60287 AC005181.1-201ENST00000604782 1256 ntBASIC20.69■□□□□ 0.9
URB1O60287 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
URB1O60287 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
URB1O60287 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.69■□□□□ 0.9
URB1O60287 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.69■□□□□ 0.9
URB1O60287 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
URB1O60287 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.69■□□□□ 0.9
URB1O60287 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
URB1O60287 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC20.68■□□□□ 0.9
URB1O60287 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.68■□□□□ 0.9
URB1O60287 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
URB1O60287 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
URB1O60287 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
URB1O60287 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.68■□□□□ 0.9
URB1O60287 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
URB1O60287 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.68■□□□□ 0.9
URB1O60287 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
URB1O60287 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
URB1O60287 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
URB1O60287 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
URB1O60287 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.68■□□□□ 0.9
URB1O60287 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
URB1O60287 RPS2P52-201ENST00000469610 820 ntBASIC20.67■□□□□ 0.9
URB1O60287 RNA5SP413-201ENST00000516373 109 ntBASIC20.67■□□□□ 0.9
URB1O60287 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
URB1O60287 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
URB1O60287 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
URB1O60287 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
URB1O60287 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
URB1O60287 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
URB1O60287 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
URB1O60287 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
URB1O60287 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
URB1O60287 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
URB1O60287 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
URB1O60287 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
URB1O60287 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.67■□□□□ 0.9
URB1O60287 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.67■□□□□ 0.9
URB1O60287 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
URB1O60287 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.67■□□□□ 0.9
URB1O60287 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
URB1O60287 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
URB1O60287 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
URB1O60287 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
URB1O60287 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
URB1O60287 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
URB1O60287 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.66■□□□□ 0.9
URB1O60287 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.66■□□□□ 0.9
URB1O60287 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms