Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP2O43734 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
TRAF3IP2O43734 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP2O43734 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP2O43734 UNC93B3-201ENST00000308076 687 ntBASIC19.53■□□□□ 0.72
TRAF3IP2O43734 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.53■□□□□ 0.72
TRAF3IP2O43734 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.53■□□□□ 0.72
TRAF3IP2O43734 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAF3IP2O43734 AL031602.1-201ENST00000633169 911 ntBASIC19.53■□□□□ 0.72
TRAF3IP2O43734 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TRAF3IP2O43734 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP2O43734 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAF3IP2O43734 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
TRAF3IP2O43734 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAF3IP2O43734 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.52■□□□□ 0.72
TRAF3IP2O43734 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.52■□□□□ 0.72
TRAF3IP2O43734 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAF3IP2O43734 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAF3IP2O43734 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAF3IP2O43734 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAF3IP2O43734 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAF3IP2O43734 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAF3IP2O43734 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAF3IP2O43734 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAF3IP2O43734 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
TRAF3IP2O43734 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAF3IP2O43734 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.52■□□□□ 0.72
TRAF3IP2O43734 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
TRAF3IP2O43734 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.71
TRAF3IP2O43734 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP2O43734 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP2O43734 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP2O43734 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP2O43734 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP2O43734 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP2O43734 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP2O43734 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAF3IP2O43734 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP2O43734 AC010525.1-201ENST00000585559 441 ntBASIC19.51■□□□□ 0.71
TRAF3IP2O43734 CA15P2-201ENST00000611168 834 ntBASIC19.51■□□□□ 0.71
TRAF3IP2O43734 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP2O43734 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
TRAF3IP2O43734 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP2O43734 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP2O43734 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAF3IP2O43734 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP2O43734 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP2O43734 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP2O43734 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.5■□□□□ 0.71
TRAF3IP2O43734 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAF3IP2O43734 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAF3IP2O43734 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP2O43734 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP2O43734 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP2O43734 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP2O43734 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP2O43734 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP2O43734 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAF3IP2O43734 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP2O43734 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP2O43734 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAF3IP2O43734 AC024257.2-201ENST00000549699 147 ntBASIC19.49■□□□□ 0.71
TRAF3IP2O43734 AL136162.1-201ENST00000607711 1078 ntBASIC19.49■□□□□ 0.71
TRAF3IP2O43734 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP2O43734 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRAF3IP2O43734 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP2O43734 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAF3IP2O43734 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP2O43734 AC080038.3-201ENST00000623346 1952 ntBASIC19.48■□□□□ 0.71
TRAF3IP2O43734 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
TRAF3IP2O43734 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP2O43734 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP2O43734 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP2O43734 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP2O43734 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP2O43734 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRAF3IP2O43734 AC096631.2-201ENST00000436136 790 ntBASIC19.48■□□□□ 0.71
TRAF3IP2O43734 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAF3IP2O43734 MIR4767-201ENST00000582827 78 ntBASIC19.48■□□□□ 0.71
TRAF3IP2O43734 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAF3IP2O43734 AC242852.2-201ENST00000615738 1807 ntBASIC19.48■□□□□ 0.71
TRAF3IP2O43734 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.48■□□□□ 0.71
TRAF3IP2O43734 ECEL1P1-201ENST00000373592 1742 ntBASIC19.48■□□□□ 0.71
TRAF3IP2O43734 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
TRAF3IP2O43734 AC137767.1-201ENST00000602918 1920 ntBASIC19.47■□□□□ 0.71
TRAF3IP2O43734 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAF3IP2O43734 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP2O43734 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP2O43734 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAF3IP2O43734 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAF3IP2O43734 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRAF3IP2O43734 SLC47A1P1-202ENST00000449666 945 ntBASIC19.47■□□□□ 0.71
TRAF3IP2O43734 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAF3IP2O43734 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP2O43734 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP2O43734 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP2O43734 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP2O43734 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAF3IP2O43734 AC135279.3-201ENST00000610945 1311 ntBASIC19.47■□□□□ 0.71
TRAF3IP2O43734 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms