Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN4O14493 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN4O14493 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
CLDN4O14493 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN4O14493 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN4O14493 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.62■□□□□ 0.89
CLDN4O14493 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.62■□□□□ 0.89
CLDN4O14493 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC20.62■□□□□ 0.89
CLDN4O14493 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CLDN4O14493 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CLDN4O14493 CA15P2-201ENST00000611168 834 ntBASIC20.62■□□□□ 0.89
CLDN4O14493 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN4O14493 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN4O14493 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
CLDN4O14493 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CLDN4O14493 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CLDN4O14493 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.62■□□□□ 0.89
CLDN4O14493 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN4O14493 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
CLDN4O14493 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN4O14493 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN4O14493 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.61■□□□□ 0.89
CLDN4O14493 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN4O14493 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.61■□□□□ 0.89
CLDN4O14493 AL031602.1-201ENST00000633169 911 ntBASIC20.61■□□□□ 0.89
CLDN4O14493 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN4O14493 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CLDN4O14493 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CLDN4O14493 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN4O14493 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN4O14493 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN4O14493 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.6■□□□□ 0.89
CLDN4O14493 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN4O14493 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CLDN4O14493 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN4O14493 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.6■□□□□ 0.89
CLDN4O14493 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CLDN4O14493 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLDN4O14493 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN4O14493 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
CLDN4O14493 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.59■□□□□ 0.89
CLDN4O14493 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN4O14493 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN4O14493 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN4O14493 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN4O14493 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN4O14493 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN4O14493 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.59■□□□□ 0.89
CLDN4O14493 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN4O14493 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN4O14493 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.59■□□□□ 0.89
CLDN4O14493 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CLDN4O14493 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.59■□□□□ 0.89
CLDN4O14493 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLDN4O14493 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN4O14493 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
CLDN4O14493 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CLDN4O14493 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CLDN4O14493 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN4O14493 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.58■□□□□ 0.89
CLDN4O14493 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.58■□□□□ 0.89
CLDN4O14493 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CLDN4O14493 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.58■□□□□ 0.89
CLDN4O14493 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.58■□□□□ 0.89
CLDN4O14493 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN4O14493 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
CLDN4O14493 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.58■□□□□ 0.88
CLDN4O14493 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN4O14493 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN4O14493 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN4O14493 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLDN4O14493 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN4O14493 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN4O14493 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CLDN4O14493 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.57■□□□□ 0.88
CLDN4O14493 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.57■□□□□ 0.88
CLDN4O14493 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN4O14493 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN4O14493 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.57■□□□□ 0.88
CLDN4O14493 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.57■□□□□ 0.88
CLDN4O14493 AC010141.3-201ENST00000456659 717 ntBASIC20.57■□□□□ 0.88
CLDN4O14493 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN4O14493 IGHV3-19-201ENST00000521488 291 ntBASIC20.57■□□□□ 0.88
CLDN4O14493 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN4O14493 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN4O14493 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLDN4O14493 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.56■□□□□ 0.88
CLDN4O14493 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN4O14493 C9orf163-202ENST00000624034 2573 ntBASIC20.56■□□□□ 0.88
CLDN4O14493 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN4O14493 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN4O14493 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.56■□□□□ 0.88
CLDN4O14493 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN4O14493 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.56■□□□□ 0.88
CLDN4O14493 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN4O14493 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN4O14493 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CLDN4O14493 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN4O14493 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CLDN4O14493 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms