Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SDCBPO00560 Z92544.1-202ENST00000571933 1220 ntBASIC18.58■□□□□ 0.56
SDCBPO00560 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC18.58■□□□□ 0.56
SDCBPO00560 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.58■□□□□ 0.56
SDCBPO00560 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SDCBPO00560 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SDCBPO00560 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SDCBPO00560 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SDCBPO00560 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SDCBPO00560 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SDCBPO00560 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.57■□□□□ 0.56
SDCBPO00560 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SDCBPO00560 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC18.57■□□□□ 0.56
SDCBPO00560 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SDCBPO00560 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.57■□□□□ 0.56
SDCBPO00560 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.57■□□□□ 0.56
SDCBPO00560 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.57■□□□□ 0.56
SDCBPO00560 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.57■□□□□ 0.56
SDCBPO00560 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC18.57■□□□□ 0.56
SDCBPO00560 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.57■□□□□ 0.56
SDCBPO00560 AC087742.1-201ENST00000575880 1738 ntBASIC18.57■□□□□ 0.56
SDCBPO00560 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SDCBPO00560 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SDCBPO00560 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SDCBPO00560 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
SDCBPO00560 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.56■□□□□ 0.56
SDCBPO00560 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SDCBPO00560 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SDCBPO00560 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SDCBPO00560 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SDCBPO00560 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SDCBPO00560 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SDCBPO00560 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SDCBPO00560 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.56■□□□□ 0.56
SDCBPO00560 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SDCBPO00560 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SDCBPO00560 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SDCBPO00560 MIR6722-201ENST00000617286 78 ntBASIC18.56■□□□□ 0.56
SDCBPO00560 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC18.56■□□□□ 0.56
SDCBPO00560 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SDCBPO00560 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.56■□□□□ 0.56
SDCBPO00560 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SDCBPO00560 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
SDCBPO00560 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SDCBPO00560 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.55■□□□□ 0.56
SDCBPO00560 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SDCBPO00560 AC005703.6-201ENST00000623265 1329 ntBASIC18.55■□□□□ 0.56
SDCBPO00560 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SDCBPO00560 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SDCBPO00560 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC18.55■□□□□ 0.56
SDCBPO00560 AC092028.1-203ENST00000608262 953 ntBASIC18.55■□□□□ 0.56
SDCBPO00560 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.55■□□□□ 0.56
SDCBPO00560 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.55■□□□□ 0.56
SDCBPO00560 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SDCBPO00560 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SDCBPO00560 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SDCBPO00560 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SDCBPO00560 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SDCBPO00560 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SDCBPO00560 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SDCBPO00560 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SDCBPO00560 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SDCBPO00560 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.54■□□□□ 0.56
SDCBPO00560 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SDCBPO00560 AC239859.2-201ENST00000444165 318 ntBASIC18.54■□□□□ 0.56
SDCBPO00560 AC009299.2-201ENST00000482477 511 ntBASIC18.54■□□□□ 0.56
SDCBPO00560 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SDCBPO00560 MIR4787-201ENST00000607364 84 ntBASIC18.54■□□□□ 0.56
SDCBPO00560 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SDCBPO00560 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SDCBPO00560 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SDCBPO00560 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SDCBPO00560 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SDCBPO00560 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SDCBPO00560 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
SDCBPO00560 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SDCBPO00560 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SDCBPO00560 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SDCBPO00560 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC18.53■□□□□ 0.56
SDCBPO00560 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SDCBPO00560 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SDCBPO00560 MTDHP2-201ENST00000601468 714 ntBASIC18.53■□□□□ 0.56
SDCBPO00560 AL451085.2-201ENST00000605085 799 ntBASIC18.53■□□□□ 0.56
SDCBPO00560 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.53■□□□□ 0.56
SDCBPO00560 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SDCBPO00560 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SDCBPO00560 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC18.52■□□□□ 0.56
SDCBPO00560 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SDCBPO00560 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.52■□□□□ 0.56
SDCBPO00560 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SDCBPO00560 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.52■□□□□ 0.56
SDCBPO00560 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.52■□□□□ 0.56
SDCBPO00560 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.52■□□□□ 0.56
SDCBPO00560 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
SDCBPO00560 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SDCBPO00560 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SDCBPO00560 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SDCBPO00560 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SDCBPO00560 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SDCBPO00560 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms