Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 MIR3960-201ENST00000583311 91 ntBASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 MED25-210ENST00000612854 801 ntTSL 5 BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 MED25-214ENST00000622402 642 ntTSL 5 BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 AC244015.2-201ENST00000616358 1861 ntBASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 AL022069.1-201ENST00000568025 1636 ntBASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 AC021231.2-201ENST00000594613 730 ntBASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
TMEM256-PLSCR3K7ERE1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms