Protein–RNA interactions for Protein: A6NKL6

TMEM200C, Transmembrane protein 200C, humanhuman

Predictions only

Length 621 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200CA6NKL6 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM200CA6NKL6 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM200CA6NKL6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
TMEM200CA6NKL6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
TMEM200CA6NKL6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM200CA6NKL6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.3■□□□□ 0.84
TMEM200CA6NKL6 RARRES2P6-201ENST00000567333 442 ntBASIC20.3■□□□□ 0.84
TMEM200CA6NKL6 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.3■□□□□ 0.84
TMEM200CA6NKL6 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TMEM200CA6NKL6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
TMEM200CA6NKL6 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.29■□□□□ 0.84
TMEM200CA6NKL6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.29■□□□□ 0.84
TMEM200CA6NKL6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM200CA6NKL6 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM200CA6NKL6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.29■□□□□ 0.84
TMEM200CA6NKL6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TMEM200CA6NKL6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM200CA6NKL6 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM200CA6NKL6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM200CA6NKL6 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.29■□□□□ 0.84
TMEM200CA6NKL6 AC104564.3-201ENST00000582367 638 ntBASIC20.29■□□□□ 0.84
TMEM200CA6NKL6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.29■□□□□ 0.84
TMEM200CA6NKL6 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM200CA6NKL6 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TMEM200CA6NKL6 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 AC026271.2-201ENST00000428091 497 ntBASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TMEM200CA6NKL6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.27■□□□□ 0.84
TMEM200CA6NKL6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TMEM200CA6NKL6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM200CA6NKL6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM200CA6NKL6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM200CA6NKL6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM200CA6NKL6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM200CA6NKL6 MIR572-201ENST00000384983 95 ntBASIC20.27■□□□□ 0.84
TMEM200CA6NKL6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
TMEM200CA6NKL6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TMEM200CA6NKL6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.27■□□□□ 0.83
TMEM200CA6NKL6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TMEM200CA6NKL6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM200CA6NKL6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM200CA6NKL6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEM200CA6NKL6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM200CA6NKL6 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.26■□□□□ 0.83
TMEM200CA6NKL6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM200CA6NKL6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM200CA6NKL6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEM200CA6NKL6 DUSP8P5-201ENST00000422884 1815 ntBASIC20.25■□□□□ 0.83
TMEM200CA6NKL6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.25■□□□□ 0.83
TMEM200CA6NKL6 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM200CA6NKL6 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.25■□□□□ 0.83
TMEM200CA6NKL6 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM200CA6NKL6 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.25■□□□□ 0.83
TMEM200CA6NKL6 AC068587.7-201ENST00000641602 218 ntBASIC20.25■□□□□ 0.83
TMEM200CA6NKL6 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TMEM200CA6NKL6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.25■□□□□ 0.83
TMEM200CA6NKL6 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM200CA6NKL6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM200CA6NKL6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.25■□□□□ 0.83
TMEM200CA6NKL6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.25■□□□□ 0.83
TMEM200CA6NKL6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM200CA6NKL6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM200CA6NKL6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.24■□□□□ 0.83
TMEM200CA6NKL6 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM200CA6NKL6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.24■□□□□ 0.83
TMEM200CA6NKL6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM200CA6NKL6 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.24■□□□□ 0.83
TMEM200CA6NKL6 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM200CA6NKL6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM200CA6NKL6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.24■□□□□ 0.83
TMEM200CA6NKL6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM200CA6NKL6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.24■□□□□ 0.83
TMEM200CA6NKL6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.24■□□□□ 0.83
TMEM200CA6NKL6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.24■□□□□ 0.83
TMEM200CA6NKL6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.24■□□□□ 0.83
TMEM200CA6NKL6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
TMEM200CA6NKL6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TMEM200CA6NKL6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.24■□□□□ 0.83
TMEM200CA6NKL6 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.23■□□□□ 0.83
TMEM200CA6NKL6 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.23■□□□□ 0.83
TMEM200CA6NKL6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.23■□□□□ 0.83
TMEM200CA6NKL6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM200CA6NKL6 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TMEM200CA6NKL6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TMEM200CA6NKL6 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms