Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.73■□□□□ 0.59
MEIS3P1A6NDR6 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC18.73■□□□□ 0.59
MEIS3P1A6NDR6 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
MEIS3P1A6NDR6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
MEIS3P1A6NDR6 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MEIS3P1A6NDR6 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MEIS3P1A6NDR6 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MEIS3P1A6NDR6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
MEIS3P1A6NDR6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
MEIS3P1A6NDR6 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.72■□□□□ 0.59
MEIS3P1A6NDR6 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MEIS3P1A6NDR6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.72■□□□□ 0.59
MEIS3P1A6NDR6 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
MEIS3P1A6NDR6 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MEIS3P1A6NDR6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
MEIS3P1A6NDR6 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
MEIS3P1A6NDR6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
MEIS3P1A6NDR6 RNF126P1-201ENST00000567452 1320 ntBASIC18.72■□□□□ 0.59
MEIS3P1A6NDR6 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC18.71■□□□□ 0.59
MEIS3P1A6NDR6 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC18.71■□□□□ 0.59
MEIS3P1A6NDR6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MEIS3P1A6NDR6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MEIS3P1A6NDR6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MEIS3P1A6NDR6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MEIS3P1A6NDR6 MIR4449-201ENST00000578365 66 ntBASIC18.71■□□□□ 0.59
MEIS3P1A6NDR6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MEIS3P1A6NDR6 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
MEIS3P1A6NDR6 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
MEIS3P1A6NDR6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
MEIS3P1A6NDR6 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.58
MEIS3P1A6NDR6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MEIS3P1A6NDR6 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MEIS3P1A6NDR6 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
MEIS3P1A6NDR6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.7■□□□□ 0.58
MEIS3P1A6NDR6 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC18.7■□□□□ 0.58
MEIS3P1A6NDR6 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MEIS3P1A6NDR6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MEIS3P1A6NDR6 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
MEIS3P1A6NDR6 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.7■□□□□ 0.58
MEIS3P1A6NDR6 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.7■□□□□ 0.58
MEIS3P1A6NDR6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.7■□□□□ 0.58
MEIS3P1A6NDR6 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
MEIS3P1A6NDR6 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MEIS3P1A6NDR6 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
MEIS3P1A6NDR6 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
MEIS3P1A6NDR6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
MEIS3P1A6NDR6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MEIS3P1A6NDR6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MEIS3P1A6NDR6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MEIS3P1A6NDR6 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.69■□□□□ 0.58
MEIS3P1A6NDR6 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
MEIS3P1A6NDR6 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
MEIS3P1A6NDR6 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
MEIS3P1A6NDR6 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MEIS3P1A6NDR6 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
MEIS3P1A6NDR6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
MEIS3P1A6NDR6 AF131216.4-201ENST00000638924 1588 ntBASIC18.68■□□□□ 0.58
MEIS3P1A6NDR6 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MEIS3P1A6NDR6 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MEIS3P1A6NDR6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC18.68■□□□□ 0.58
MEIS3P1A6NDR6 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
MEIS3P1A6NDR6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MEIS3P1A6NDR6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
MEIS3P1A6NDR6 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.68■□□□□ 0.58
MEIS3P1A6NDR6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
MEIS3P1A6NDR6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
MEIS3P1A6NDR6 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MEIS3P1A6NDR6 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
MEIS3P1A6NDR6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.67■□□□□ 0.58
MEIS3P1A6NDR6 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
MEIS3P1A6NDR6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC18.67■□□□□ 0.58
MEIS3P1A6NDR6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MEIS3P1A6NDR6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MEIS3P1A6NDR6 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MEIS3P1A6NDR6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
MEIS3P1A6NDR6 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MEIS3P1A6NDR6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.67■□□□□ 0.58
MEIS3P1A6NDR6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MEIS3P1A6NDR6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MEIS3P1A6NDR6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
MEIS3P1A6NDR6 AC144652.1-201ENST00000609974 1624 ntBASIC18.67■□□□□ 0.58
MEIS3P1A6NDR6 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 AC004448.1-201ENST00000458332 883 ntBASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 AC129492.7-201ENST00000622992 756 ntBASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
MEIS3P1A6NDR6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms