Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 AC127496.7-201ENST00000625110 1798 ntBASIC20.87■□□□□ 0.93
LRIT2A6NDA9 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.87■□□□□ 0.93
LRIT2A6NDA9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRIT2A6NDA9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRIT2A6NDA9 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LRIT2A6NDA9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
LRIT2A6NDA9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRIT2A6NDA9 AL139246.5-201ENST00000606645 996 ntBASIC20.87■□□□□ 0.93
LRIT2A6NDA9 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LRIT2A6NDA9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRIT2A6NDA9 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRIT2A6NDA9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRIT2A6NDA9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRIT2A6NDA9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRIT2A6NDA9 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRIT2A6NDA9 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.86■□□□□ 0.93
LRIT2A6NDA9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.86■□□□□ 0.93
LRIT2A6NDA9 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRIT2A6NDA9 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
LRIT2A6NDA9 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.86■□□□□ 0.93
LRIT2A6NDA9 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LRIT2A6NDA9 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRIT2A6NDA9 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRIT2A6NDA9 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LRIT2A6NDA9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRIT2A6NDA9 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRIT2A6NDA9 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRIT2A6NDA9 BX842568.3-201ENST00000418104 571 ntBASIC20.85■□□□□ 0.93
LRIT2A6NDA9 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.85■□□□□ 0.93
LRIT2A6NDA9 CA15P2-201ENST00000611168 834 ntBASIC20.85■□□□□ 0.93
LRIT2A6NDA9 AC068587.7-201ENST00000641602 218 ntBASIC20.85■□□□□ 0.93
LRIT2A6NDA9 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LRIT2A6NDA9 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.85■□□□□ 0.93
LRIT2A6NDA9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRIT2A6NDA9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
LRIT2A6NDA9 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRIT2A6NDA9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRIT2A6NDA9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRIT2A6NDA9 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRIT2A6NDA9 EDA-201ENST00000338901 1233 ntBASIC20.84■□□□□ 0.93
LRIT2A6NDA9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.84■□□□□ 0.93
LRIT2A6NDA9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRIT2A6NDA9 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.84■□□□□ 0.93
LRIT2A6NDA9 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.84■□□□□ 0.93
LRIT2A6NDA9 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRIT2A6NDA9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRIT2A6NDA9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRIT2A6NDA9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
LRIT2A6NDA9 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.84■□□□□ 0.93
LRIT2A6NDA9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRIT2A6NDA9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LRIT2A6NDA9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRIT2A6NDA9 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRIT2A6NDA9 GUSBP5-202ENST00000510805 1989 ntBASIC20.83■□□□□ 0.93
LRIT2A6NDA9 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LRIT2A6NDA9 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRIT2A6NDA9 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.83■□□□□ 0.93
LRIT2A6NDA9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.83■□□□□ 0.93
LRIT2A6NDA9 AC133561.4-201ENST00000566112 224 ntBASIC20.83■□□□□ 0.93
LRIT2A6NDA9 AC233992.3-201ENST00000607491 485 ntBASIC20.83■□□□□ 0.93
LRIT2A6NDA9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRIT2A6NDA9 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LRIT2A6NDA9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRIT2A6NDA9 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
LRIT2A6NDA9 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRIT2A6NDA9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LRIT2A6NDA9 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRIT2A6NDA9 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRIT2A6NDA9 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRIT2A6NDA9 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.82■□□□□ 0.92
LRIT2A6NDA9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
LRIT2A6NDA9 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.82■□□□□ 0.92
LRIT2A6NDA9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRIT2A6NDA9 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.82■□□□□ 0.92
LRIT2A6NDA9 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.82■□□□□ 0.92
LRIT2A6NDA9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRIT2A6NDA9 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRIT2A6NDA9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
LRIT2A6NDA9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
LRIT2A6NDA9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRIT2A6NDA9 AC137767.1-201ENST00000602918 1920 ntBASIC20.82■□□□□ 0.92
LRIT2A6NDA9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
LRIT2A6NDA9 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRIT2A6NDA9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRIT2A6NDA9 AL117328.2-201ENST00000624617 1940 ntBASIC20.81■□□□□ 0.92
LRIT2A6NDA9 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRIT2A6NDA9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.81■□□□□ 0.92
LRIT2A6NDA9 AP005435.1-201ENST00000529293 1178 ntBASIC20.81■□□□□ 0.92
LRIT2A6NDA9 GRAMD4P4-201ENST00000613563 1115 ntBASIC20.81■□□□□ 0.92
LRIT2A6NDA9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.81■□□□□ 0.92
LRIT2A6NDA9 AL355001.2-201ENST00000620617 1191 ntBASIC20.81■□□□□ 0.92
LRIT2A6NDA9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
LRIT2A6NDA9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRIT2A6NDA9 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRIT2A6NDA9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
LRIT2A6NDA9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRIT2A6NDA9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRIT2A6NDA9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.81■□□□□ 0.92
LRIT2A6NDA9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.81■□□□□ 0.92
LRIT2A6NDA9 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms