Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 OXCT2P1-201ENST00000447263 1535 ntBASIC19.97■□□□□ 0.79
TRAV17A0A0B4J275 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV17A0A0B4J275 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV17A0A0B4J275 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV17A0A0B4J275 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV17A0A0B4J275 ABCB10P4-201ENST00000566803 2184 ntBASIC19.96■□□□□ 0.79
TRAV17A0A0B4J275 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.96■□□□□ 0.79
TRAV17A0A0B4J275 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.96■□□□□ 0.79
TRAV17A0A0B4J275 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
TRAV17A0A0B4J275 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC19.95■□□□□ 0.78
TRAV17A0A0B4J275 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRAV17A0A0B4J275 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV17A0A0B4J275 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
TRAV17A0A0B4J275 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV17A0A0B4J275 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV17A0A0B4J275 ID1-201ENST00000376105 1233 ntBASIC19.95■□□□□ 0.78
TRAV17A0A0B4J275 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV17A0A0B4J275 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV17A0A0B4J275 AC006015.1-201ENST00000429970 570 ntBASIC19.95■□□□□ 0.78
TRAV17A0A0B4J275 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV17A0A0B4J275 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV17A0A0B4J275 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRAV17A0A0B4J275 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAV17A0A0B4J275 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV17A0A0B4J275 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.94■□□□□ 0.78
TRAV17A0A0B4J275 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
TRAV17A0A0B4J275 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.94■□□□□ 0.78
TRAV17A0A0B4J275 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
TRAV17A0A0B4J275 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
TRAV17A0A0B4J275 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV17A0A0B4J275 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.94■□□□□ 0.78
TRAV17A0A0B4J275 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAV17A0A0B4J275 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV17A0A0B4J275 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAV17A0A0B4J275 AP004607.4-201ENST00000530158 1459 ntBASIC19.93■□□□□ 0.78
TRAV17A0A0B4J275 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV17A0A0B4J275 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.93■□□□□ 0.78
TRAV17A0A0B4J275 KRT19P1-201ENST00000405746 1186 ntBASIC19.93■□□□□ 0.78
TRAV17A0A0B4J275 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
TRAV17A0A0B4J275 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV17A0A0B4J275 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAV17A0A0B4J275 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAV17A0A0B4J275 KRT18P61-201ENST00000585825 1298 ntBASIC19.93■□□□□ 0.78
TRAV17A0A0B4J275 AC080038.1-201ENST00000611274 1154 ntBASIC19.93■□□□□ 0.78
TRAV17A0A0B4J275 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAV17A0A0B4J275 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV17A0A0B4J275 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV17A0A0B4J275 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
TRAV17A0A0B4J275 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 AC004854.2-201ENST00000608450 1441 ntBASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV17A0A0B4J275 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV17A0A0B4J275 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAV17A0A0B4J275 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV17A0A0B4J275 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAV17A0A0B4J275 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.91■□□□□ 0.78
TRAV17A0A0B4J275 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
TRAV17A0A0B4J275 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV17A0A0B4J275 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAV17A0A0B4J275 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV17A0A0B4J275 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAV17A0A0B4J275 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAV17A0A0B4J275 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAV17A0A0B4J275 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV17A0A0B4J275 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV17A0A0B4J275 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV17A0A0B4J275 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
TRAV17A0A0B4J275 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV17A0A0B4J275 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRAV17A0A0B4J275 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV17A0A0B4J275 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV17A0A0B4J275 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRAV17A0A0B4J275 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.9■□□□□ 0.78
TRAV17A0A0B4J275 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.9■□□□□ 0.78
TRAV17A0A0B4J275 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV17A0A0B4J275 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
TRAV17A0A0B4J275 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV17A0A0B4J275 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV17A0A0B4J275 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
TRAV17A0A0B4J275 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV17A0A0B4J275 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV17A0A0B4J275 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV17A0A0B4J275 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms