Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 CREM-229ENST00000474362 1030 ntTSL 2 BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 UNC93B8-201ENST00000511903 705 ntBASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRAV12-3A0A0B4J271 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 MIR6724-1-201ENST00000616420 92 ntBASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 MIR6724-2-201ENST00000616483 92 ntBASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 MIR6724-4-201ENST00000617390 92 ntBASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 MIR6724-3-201ENST00000622482 92 ntBASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRAV12-3A0A0B4J271 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV12-3A0A0B4J271 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-3A0A0B4J271 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRAV12-3A0A0B4J271 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV12-3A0A0B4J271 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-3A0A0B4J271 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-3A0A0B4J271 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
TRAV12-3A0A0B4J271 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV12-3A0A0B4J271 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-3A0A0B4J271 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.22■□□□□ 0.19
TRAV12-3A0A0B4J271 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRAV12-3A0A0B4J271 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 AC004687.1-201ENST00000579003 1625 ntBASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 KRT16P3-201ENST00000439127 1283 ntBASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 OR2A1-AS1-204ENST00000470435 602 ntBASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 AC087742.1-201ENST00000575880 1738 ntBASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
TRAV12-3A0A0B4J271 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV12-3A0A0B4J271 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
TRAV12-3A0A0B4J271 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
TRAV12-3A0A0B4J271 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 AC080038.3-201ENST00000623346 1952 ntBASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 C17orf82-201ENST00000623772 1530 ntBASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 AK3-203ENST00000447596 705 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
TRAV12-3A0A0B4J271 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms