Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV8-6A0A0B4J262 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 AC120024.1-201ENST00000562672 995 ntBASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
TRAV8-6A0A0B4J262 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-6A0A0B4J262 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-6A0A0B4J262 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
TRAV8-6A0A0B4J262 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-6A0A0B4J262 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-6A0A0B4J262 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TRAV8-6A0A0B4J262 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-6A0A0B4J262 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAV8-6A0A0B4J262 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-6A0A0B4J262 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-6A0A0B4J262 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TRAV8-6A0A0B4J262 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-6A0A0B4J262 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC15.99■□□□□ 0.15
TRAV8-6A0A0B4J262 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV8-6A0A0B4J262 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV8-6A0A0B4J262 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
TRAV8-6A0A0B4J262 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC15.98■□□□□ 0.15
TRAV8-6A0A0B4J262 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 AL031848.2-201ENST00000607670 837 ntBASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TRAV8-6A0A0B4J262 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms