Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 DUX4L13-201ENST00000554103 1267 ntBASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 DUX4L15-201ENST00000611059 1267 ntBASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 DUX4L23-201ENST00000615195 1269 ntBASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 DUX4L24-201ENST00000617576 1269 ntBASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 DUX4L22-201ENST00000618238 1269 ntBASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 DUX4L20-201ENST00000619712 1269 ntBASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 DUX4L21-201ENST00000622058 1269 ntBASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 DUX4L10-201ENST00000622460 1267 ntBASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 DUX4L25-201ENST00000624915 1269 ntBASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV9-1A0A075B6T8 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV9-1A0A075B6T8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC16.46■□□□□ 0.22
TRAV9-1A0A075B6T8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV9-1A0A075B6T8 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.46■□□□□ 0.22
TRAV9-1A0A075B6T8 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV9-1A0A075B6T8 LINC01006-201ENST00000333319 2292 ntBASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 AL353803.4-201ENST00000565882 1934 ntBASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 HLA-V-202ENST00000446817 847 ntBASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAV9-1A0A075B6T8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-1A0A075B6T8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV9-1A0A075B6T8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-1A0A075B6T8 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-1A0A075B6T8 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-1A0A075B6T8 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-1A0A075B6T8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
TRAV9-1A0A075B6T8 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV9-1A0A075B6T8 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
TRAV9-1A0A075B6T8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-1A0A075B6T8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-1A0A075B6T8 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-1A0A075B6T8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-1A0A075B6T8 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV9-1A0A075B6T8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-1A0A075B6T8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV9-1A0A075B6T8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV9-1A0A075B6T8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-1A0A075B6T8 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV9-1A0A075B6T8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV9-1A0A075B6T8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-1A0A075B6T8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-1A0A075B6T8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV9-1A0A075B6T8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV9-1A0A075B6T8 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-1A0A075B6T8 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-1A0A075B6T8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV9-1A0A075B6T8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TRAV9-1A0A075B6T8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV9-1A0A075B6T8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRAV9-1A0A075B6T8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV9-1A0A075B6T8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV9-1A0A075B6T8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV9-1A0A075B6T8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV9-1A0A075B6T8 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TRAV9-1A0A075B6T8 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV9-1A0A075B6T8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC16.42■□□□□ 0.22
TRAV9-1A0A075B6T8 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV9-1A0A075B6T8 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV9-1A0A075B6T8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV9-1A0A075B6T8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV9-1A0A075B6T8 DUX4L29-201ENST00000425409 679 ntBASIC16.42■□□□□ 0.22
TRAV9-1A0A075B6T8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
TRAV9-1A0A075B6T8 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
TRAV9-1A0A075B6T8 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
TRAV9-1A0A075B6T8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV9-1A0A075B6T8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms