Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 TMEM246-202ENST00000374848 4244 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
P04436 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC11.79□□□□□ -0.52
P04436 FMO1-203ENST00000402921 2003 ntTSL 2 BASIC11.79□□□□□ -0.52
P04436 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 AC073488.1-201ENST00000416620 1600 ntBASIC11.79□□□□□ -0.52
P04436 KLHL23-202ENST00000392647 4077 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 CACNA1C-219ENST00000399649 6529 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC11.79□□□□□ -0.52
P04436 NOS3-201ENST00000297494 4388 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 SLC6A6-204ENST00000613060 6526 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 AC020915.2-201ENST00000591325 4227 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
P04436 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 GPR119-201ENST00000276218 1008 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
P04436 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC11.79□□□□□ -0.52
P04436 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
P04436 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 NAA10-205ENST00000393712 908 ntTSL 5 BASIC11.79□□□□□ -0.52
P04436 AL357373.1-201ENST00000394974 322 ntBASIC11.79□□□□□ -0.52
P04436 PGAM1P10-201ENST00000402426 761 ntBASIC11.79□□□□□ -0.52
P04436 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.79□□□□□ -0.52
P04436 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
P04436 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 DEFA8P-201ENST00000457582 285 ntBASIC11.79□□□□□ -0.52
P04436 DERL1-204ENST00000519018 575 ntTSL 4 BASIC11.79□□□□□ -0.52
P04436 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
P04436 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC11.79□□□□□ -0.52
P04436 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC11.79□□□□□ -0.52
P04436 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC11.79□□□□□ -0.52
P04436 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC11.79□□□□□ -0.52
P04436 AC092756.1-201ENST00000560248 448 ntTSL 3 BASIC11.79□□□□□ -0.52
P04436 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC11.79□□□□□ -0.52
P04436 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC11.79□□□□□ -0.52
P04436 AC106782.5-201ENST00000616011 337 ntBASIC11.79□□□□□ -0.52
P04436 AR-208ENST00000612452 10676 ntTSL 5 BASIC11.79□□□□□ -0.52
P04436 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
P04436 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 PPT1-204ENST00000439754 2195 ntTSL 3 BASIC11.79□□□□□ -0.52
P04436 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC11.79□□□□□ -0.52
P04436 LIN28B-203ENST00000637759 2635 ntTSL 5 BASIC11.79□□□□□ -0.52
P04436 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 DNASE1L3-207ENST00000486455 1321 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
P04436 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 AACS-201ENST00000316519 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 KRT40-202ENST00000398486 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.79□□□□□ -0.52
P04436 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
P04436 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 IL12RB1-207ENST00000600835 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 TUBGCP4-208ENST00000564079 6798 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
P04436 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC11.79□□□□□ -0.52
P04436 AP003969.2-201ENST00000623739 2275 ntBASIC11.79□□□□□ -0.52
P04436 FOXK1-201ENST00000328914 11181 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
P04436 CD36-207ENST00000432207 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC11.79□□□□□ -0.52
P04436 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 OPRM1-210ENST00000452687 1352 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
P04436 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
P04436 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC11.78□□□□□ -0.52
P04436 ANGEL1-205ENST00000557179 1427 ntTSL 2 BASIC11.78□□□□□ -0.52
P04436 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
P04436 MRPS16-202ENST00000372945 2634 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 PANK3-201ENST00000239231 10506 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 TUBGCP2-210ENST00000543663 4302 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 AP002761.4-201ENST00000565433 3361 ntBASIC11.78□□□□□ -0.52
P04436 TRIM37-203ENST00000393066 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 CACNA1C-213ENST00000399629 6562 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.78□□□□□ -0.52
P04436 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 SETDB1-202ENST00000368962 1478 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.78□□□□□ -0.52
P04436 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 DCDC2-202ENST00000378454 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC11.78□□□□□ -0.52
P04436 COQ5-201ENST00000288532 1535 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 CAMTA2-204ENST00000414043 4589 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 ZNF215-207ENST00000610573 1503 ntTSL 5 BASIC11.78□□□□□ -0.52
P04436 VPREB3-201ENST00000248948 610 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 LMO7DN-201ENST00000318245 1167 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
P04436 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 MED27-202ENST00000357028 1281 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
P04436 IGHV1-45-201ENST00000390621 411 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms