Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 TEF-202ENST00000406644 4386 ntTSL 2 BASIC12.29□□□□□ -0.44
SCN2BO60939 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 CICP7-201ENST00000432723 2477 ntBASIC12.29□□□□□ -0.44
SCN2BO60939 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SCN2BO60939 PDE7B-201ENST00000308191 5390 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
SCN2BO60939 AC011477.7-201ENST00000617163 1440 ntBASIC12.28□□□□□ -0.44
SCN2BO60939 SIRPG-202ENST00000303415 1716 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 RNF13-201ENST00000344229 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 SIRPG-204ENST00000381580 1732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 ABI1-212ENST00000490841 3188 ntTSL 2 BASIC12.28□□□□□ -0.44
SCN2BO60939 TSC22D3-206ENST00000372397 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 ZNF502-203ENST00000436624 2314 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SCN2BO60939 TBC1D31-201ENST00000287380 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 CYLD-214ENST00000569418 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 TUBGCP4-208ENST00000564079 6798 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
SCN2BO60939 HADH-210ENST00000626637 1774 ntTSL 2 BASIC12.28□□□□□ -0.44
SCN2BO60939 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SCN2BO60939 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 ZNF473-205ENST00000595661 4828 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
SCN2BO60939 RFWD3-202ENST00000571750 3033 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SCN2BO60939 ATP11A-202ENST00000375645 8795 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
SCN2BO60939 MBP-207ENST00000397865 2127 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 EMB-201ENST00000303221 4281 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 TIAM1-206ENST00000541036 7018 ntTSL 5 BASIC12.28□□□□□ -0.44
SCN2BO60939 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 AC008132.1-203ENST00000412938 5920 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 AC087164.2-201ENST00000624514 3130 ntBASIC12.28□□□□□ -0.44
SCN2BO60939 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 PLAT-202ENST00000352041 2516 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 COQ4-202ENST00000372875 928 ntTSL 2 BASIC12.28□□□□□ -0.44
SCN2BO60939 POLR2F-202ENST00000405557 560 ntTSL 5 BASIC12.28□□□□□ -0.44
SCN2BO60939 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC12.28□□□□□ -0.44
SCN2BO60939 RIBC1-203ENST00000414955 1281 ntTSL 2 BASIC12.28□□□□□ -0.44
SCN2BO60939 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC12.28□□□□□ -0.44
SCN2BO60939 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.28□□□□□ -0.44
SCN2BO60939 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC12.28□□□□□ -0.44
SCN2BO60939 VDAC1P11-201ENST00000458323 852 ntBASIC12.28□□□□□ -0.44
SCN2BO60939 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.28□□□□□ -0.44
SCN2BO60939 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC12.28□□□□□ -0.44
SCN2BO60939 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC12.28□□□□□ -0.44
SCN2BO60939 ANAPC15-209ENST00000538919 849 ntAPPRIS P3 TSL 3 BASIC12.28□□□□□ -0.44
SCN2BO60939 GOLGA2P10-201ENST00000550961 817 ntBASIC12.28□□□□□ -0.44
SCN2BO60939 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
SCN2BO60939 CYP2B7P-202ENST00000593298 1087 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC12.28□□□□□ -0.44
SCN2BO60939 AC087045.2-201ENST00000606279 1003 ntBASIC12.28□□□□□ -0.44
SCN2BO60939 POLR2F-213ENST00000606538 760 ntTSL 2 BASIC12.28□□□□□ -0.44
SCN2BO60939 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC12.28□□□□□ -0.44
SCN2BO60939 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC12.28□□□□□ -0.44
SCN2BO60939 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC12.28□□□□□ -0.44
SCN2BO60939 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC12.28□□□□□ -0.44
SCN2BO60939 P3H2-201ENST00000319332 3509 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 ENO2-214ENST00000545045 1911 ntTSL 5 BASIC12.28□□□□□ -0.44
SCN2BO60939 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC12.28□□□□□ -0.44
SCN2BO60939 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SCN2BO60939 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC12.28□□□□□ -0.44
SCN2BO60939 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SCN2BO60939 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 CDC25C-202ENST00000348983 1951 ntTSL 5 BASIC12.28□□□□□ -0.44
SCN2BO60939 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 AC022497.1-201ENST00000624916 3691 ntBASIC12.28□□□□□ -0.44
SCN2BO60939 HOPX-211ENST00000554144 1672 ntTSL 5 BASIC12.28□□□□□ -0.44
SCN2BO60939 FAM156A-203ENST00000611661 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 ENC1-206ENST00000537006 2024 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
SCN2BO60939 GRM7-201ENST00000357716 4127 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
SCN2BO60939 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
SCN2BO60939 ZNF684-203ENST00000372699 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 MAN2C1-242ENST00000569482 3177 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 ACR-201ENST00000216139 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
SCN2BO60939 KRT8P38-201ENST00000441370 1430 ntBASIC12.28□□□□□ -0.44
SCN2BO60939 NLRX1-214ENST00000525863 2850 ntTSL 5 BASIC12.28□□□□□ -0.44
SCN2BO60939 AXIN1-202ENST00000354866 3324 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SCN2BO60939 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SCN2BO60939 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SCN2BO60939 AC021305.1-201ENST00000520656 1514 ntBASIC12.27□□□□□ -0.44
SCN2BO60939 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
SCN2BO60939 THEMIS3P-201ENST00000416112 1586 ntBASIC12.27□□□□□ -0.44
SCN2BO60939 RABL2B-203ENST00000395591 1987 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
SCN2BO60939 OPN1MW3-201ENST00000599405 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
SCN2BO60939 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC12.27□□□□□ -0.44
SCN2BO60939 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC12.27□□□□□ -0.44
SCN2BO60939 PEX11B-203ENST00000537888 1632 ntTSL 2 BASIC12.27□□□□□ -0.44
SCN2BO60939 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 ARHGAP12-203ENST00000375245 4958 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC12.27□□□□□ -0.45
SCN2BO60939 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC12.27□□□□□ -0.45
SCN2BO60939 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 NBN-201ENST00000265433 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
SCN2BO60939 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms