Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 AL121753.2-201ENST00000624581 1461 ntBASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 AIF1L-201ENST00000247291 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 DLEC1-201ENST00000308059 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 LAMTOR5-203ENST00000474861 1154 ntTSL 2 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 COQ4-204ENST00000608951 781 ntTSL 2 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 CAST-206ENST00000395812 4506 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 OR10N1P-203ENST00000641736 1305 ntBASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 BCAR1-203ENST00000393422 4064 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 SERINC4-201ENST00000299969 2318 ntTSL 5 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 BMP4-205ENST00000558984 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 RBM8A-204ENST00000583313 4961 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
POLR2J2Q9GZM3 SLC37A1-202ENST00000398341 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
POLR2J2Q9GZM3 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
POLR2J2Q9GZM3 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
POLR2J2Q9GZM3 OAS1-201ENST00000202917 1816 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
POLR2J2Q9GZM3 IPO7-201ENST00000379719 6191 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
POLR2J2Q9GZM3 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
POLR2J2Q9GZM3 PLEKHG5-205ENST00000377740 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
POLR2J2Q9GZM3 HADHB-209ENST00000545822 1870 ntTSL 5 BASIC12.02□□□□□ -0.48
POLR2J2Q9GZM3 MARCH5-201ENST00000358935 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
POLR2J2Q9GZM3 NLGN3-202ENST00000374051 3913 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
POLR2J2Q9GZM3 AP003108.3-201ENST00000623765 2234 ntBASIC12.02□□□□□ -0.48
POLR2J2Q9GZM3 STK11IP-204ENST00000456909 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
POLR2J2Q9GZM3 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
POLR2J2Q9GZM3 MAGEB10-201ENST00000356790 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 TMSB15A-201ENST00000289373 685 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 FAM21EP-201ENST00000417804 985 ntBASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 AC015818.1-201ENST00000451011 244 ntBASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 RN7SL769P-201ENST00000469386 295 ntBASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 BAK1P2-201ENST00000532665 631 ntBASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 AC127496.3-201ENST00000576032 494 ntTSL 3 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 MIR3907-201ENST00000579424 151 ntBASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 TUBB6-214ENST00000592683 481 ntTSL 4 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 CYP4F12-215ENST00000550308 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 AL606760.3-201ENST00000569869 3591 ntBASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 FLCN-201ENST00000285071 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 RHD-203ENST00000357542 1387 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 NUPL2-201ENST00000258742 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 LINC02465-203ENST00000513875 1777 ntTSL 5 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 INTS8-217ENST00000523731 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 HNRNPF-207ENST00000544000 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
POLR2J2Q9GZM3 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms