Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 SDCBP2P1-201ENST00000416115 614 ntBASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 MTHFD2P7-201ENST00000483867 983 ntBASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 CHCHD10-204ENST00000520222 384 ntTSL 3 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 AC134698.3-201ENST00000523880 214 ntBASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 AP000920.1-201ENST00000531824 344 ntBASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 AC135983.4-201ENST00000564116 1262 ntBASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 MIR6799-201ENST00000620297 69 ntBASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 GPR182-203ENST00000622922 591 ntBASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 OTUD6B-201ENST00000285420 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 AC245100.6-201ENST00000427169 1918 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 CETP-202ENST00000379780 1537 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 CSF3R-204ENST00000373104 2953 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 AIPL1-201ENST00000250087 2783 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 LINC01447-201ENST00000429010 2761 ntTSL 2 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 MRO-203ENST00000428869 1966 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 FSCN3-201ENST00000265825 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 PLXNA4-203ENST00000378539 2004 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 RP2-201ENST00000218340 3803 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 SPTLC1-201ENST00000262554 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 VOPP1-206ENST00000428097 1671 ntTSL 3 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 SPTY2D1-201ENST00000336349 5754 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 CHST4-202ENST00000539698 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 LPP-AS2-201ENST00000605573 2852 ntBASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 UBTFL5-201ENST00000443682 1191 ntBASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 PRSS46-201ENST00000463091 982 ntAPPRIS P1 TSL 4 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 RPSAP67-201ENST00000584105 862 ntBASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 AC011247.3-201ENST00000603297 438 ntBASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 AL353622.2-201ENST00000605846 425 ntBASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 RAB5B-211ENST00000628569 496 ntTSL 5 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 FRG2EP-201ENST00000634243 835 ntBASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 DYNC1I1-205ENST00000447467 2947 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 YTHDF2-208ENST00000541996 2719 ntTSL 2 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 PXN-204ENST00000424649 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 PRKAG2-202ENST00000392801 2281 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 ARL13B-201ENST00000303097 3264 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 DLGAP2-AS1-201ENST00000518009 1810 ntTSL 2 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 RPS10P7-201ENST00000441932 2329 ntTSL 2 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 SMCR5-201ENST00000543475 2844 ntBASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 ACSL6-207ENST00000379264 6539 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 WASF2-202ENST00000618852 5676 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
POLR2J2Q9GZM3 REPS1-205ENST00000415951 2424 ntTSL 5 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 SLC2A9-208ENST00000506583 1927 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 MTHFR-205ENST00000376592 8378 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 LMX1A-202ENST00000342310 3545 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
POLR2J2Q9GZM3 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms