Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
NCDNQ9UBB6 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
NCDNQ9UBB6 AL591368.1-201ENST00000437181 1449 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NCDNQ9UBB6 AC005562.1-201ENST00000583030 3219 ntBASIC12.86□□□□□ -0.35
NCDNQ9UBB6 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
NCDNQ9UBB6 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NCDNQ9UBB6 SGCE-201ENST00000265735 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NCDNQ9UBB6 CNOT4-204ENST00000414802 1687 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NCDNQ9UBB6 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC12.86□□□□□ -0.35
NCDNQ9UBB6 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NCDNQ9UBB6 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
NCDNQ9UBB6 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NCDNQ9UBB6 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NCDNQ9UBB6 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
NCDNQ9UBB6 RAP1A-201ENST00000356415 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
NCDNQ9UBB6 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
NCDNQ9UBB6 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 ABCB4-201ENST00000265723 4020 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 SCARB2-202ENST00000452464 1495 ntTSL 2 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 KRT8P5-201ENST00000592443 1458 ntBASIC12.85□□□□□ -0.35
NCDNQ9UBB6 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 DAND5-201ENST00000317060 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 GFI1B-202ENST00000372122 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 GLT6D1-201ENST00000371763 1526 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 GLT6D1-202ENST00000613244 1523 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 ELMOD3-201ENST00000315658 2685 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 RNA5SP248-201ENST00000365602 127 ntBASIC12.85□□□□□ -0.35
NCDNQ9UBB6 PRDX4-201ENST00000379331 852 ntTSL 2 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 AC087163.1-201ENST00000430089 381 ntBASIC12.85□□□□□ -0.35
NCDNQ9UBB6 AL049542.1-201ENST00000430231 278 ntBASIC12.85□□□□□ -0.35
NCDNQ9UBB6 HUS1-202ENST00000432325 1125 ntTSL 5 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 MED15P7-201ENST00000435410 822 ntBASIC12.85□□□□□ -0.35
NCDNQ9UBB6 AK2P2-201ENST00000439142 405 ntBASIC12.85□□□□□ -0.35
NCDNQ9UBB6 PIN1P1-202ENST00000439639 301 ntBASIC12.85□□□□□ -0.35
NCDNQ9UBB6 TMX3-202ENST00000443099 913 ntTSL 2 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 PFN1P3-201ENST00000443612 402 ntBASIC12.85□□□□□ -0.35
NCDNQ9UBB6 PFN1P4-201ENST00000450970 402 ntBASIC12.85□□□□□ -0.35
NCDNQ9UBB6 RN7SL483P-201ENST00000478417 285 ntBASIC12.85□□□□□ -0.35
NCDNQ9UBB6 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 GINS4-203ENST00000518671 1158 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 CD63-212ENST00000552067 621 ntTSL 5 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 AC002519.2-201ENST00000563575 539 ntTSL 4 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 ZG16B-204ENST00000572863 716 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 GDPD1-205ENST00000581140 1265 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 RN7SL733P-201ENST00000582253 329 ntBASIC12.85□□□□□ -0.35
NCDNQ9UBB6 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 RN7SL248P-201ENST00000615117 329 ntBASIC12.85□□□□□ -0.35
NCDNQ9UBB6 RN7SL453P-201ENST00000620275 329 ntBASIC12.85□□□□□ -0.35
NCDNQ9UBB6 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 CCDC175-201ENST00000281581 2487 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
NCDNQ9UBB6 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NCDNQ9UBB6 IL17RB-201ENST00000288167 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
NCDNQ9UBB6 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NCDNQ9UBB6 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
NCDNQ9UBB6 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
NCDNQ9UBB6 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NCDNQ9UBB6 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
NCDNQ9UBB6 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms