Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 FAM160A1-201ENST00000435205 4576 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 HCG2040054-202ENST00000439182 362 ntTSL 3 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 DPY19L2P5-201ENST00000456300 331 ntBASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 AC016650.1-201ENST00000502834 708 ntTSL 2 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 ETFBKMT-205ENST00000538463 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 U62317.3-201ENST00000608319 855 ntBASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 NLRP2-214ENST00000543010 3576 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 TBL1X-202ENST00000380961 4674 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 ENSA-208ENST00000369014 2085 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 ARHGEF9-205ENST00000437457 3758 ntTSL 5 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 PDHA1-206ENST00000422285 3310 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 AC145098.2-201ENST00000623593 3026 ntBASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 NANP-201ENST00000304788 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 AC074138.1-201ENST00000611182 1303 ntBASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 AC098650.1-201ENST00000635992 3535 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 STRADA-202ENST00000336174 2255 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
POLR2J2Q9GZM3 FER1L5-204ENST00000623019 6477 ntAPPRIS ALT2 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 FAM117A-209ENST00000513602 1522 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 LDLRAD1-203ENST00000420619 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 ANKRD34A-201ENST00000606888 3613 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 NFATC4-212ENST00000554473 1382 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 CDK5RAP1-201ENST00000339269 1891 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 PNMA5-203ENST00000439251 3213 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 CDK2AP2P2-201ENST00000478512 367 ntBASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 HNRNPA1P56-201ENST00000505767 954 ntBASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 TOB1-AS1-202ENST00000514358 690 ntTSL 5 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 CHMP4BP1-201ENST00000556017 588 ntBASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 RN7SL470P-201ENST00000583069 259 ntBASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 AL136982.5-201ENST00000605222 294 ntBASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 AC103691.2-201ENST00000618824 433 ntBASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 AC025262.2-201ENST00000623975 1056 ntBASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 PCDHAC1-201ENST00000253807 5299 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 TP53I11-203ENST00000395648 3381 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 ARL4A-203ENST00000396663 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 AC011511.5-201ENST00000589379 3219 ntBASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 DACH2-201ENST00000373125 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 LINC00540-203ENST00000631321 2412 ntTSL 2 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 FAM160B2-201ENST00000289921 4245 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 MAGEB1-202ENST00000397548 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
POLR2J2Q9GZM3 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 MDGA1-207ENST00000505425 3021 ntTSL 5 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 MRPL43-202ENST00000318325 2134 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 LILRA2-204ENST00000391738 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 ARHGAP25-201ENST00000409030 2936 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 MMP19-206ENST00000548629 1813 ntTSL 5 BASIC12.05□□□□□ -0.48
POLR2J2Q9GZM3 FOXJ3-202ENST00000361776 5106 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms