Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 DCAKD-203ENST00000452796 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 OR2I1P-208ENST00000641137 4948 ntBASIC11.44□□□□□ -0.58
NPIPB4C9JG80 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 NDUFS5-201ENST00000372967 544 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 NDUFS5-202ENST00000372969 548 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 OR10N1P-201ENST00000392758 869 ntBASIC11.44□□□□□ -0.58
NPIPB4C9JG80 GOLGA6L16P-201ENST00000441780 1299 ntBASIC11.44□□□□□ -0.58
NPIPB4C9JG80 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 VENTXP4-201ENST00000449029 958 ntBASIC11.44□□□□□ -0.58
NPIPB4C9JG80 AC113340.1-201ENST00000475257 636 ntBASIC11.44□□□□□ -0.58
NPIPB4C9JG80 AC114812.4-201ENST00000506676 757 ntBASIC11.44□□□□□ -0.58
NPIPB4C9JG80 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 AC023051.2-201ENST00000541141 460 ntBASIC11.44□□□□□ -0.58
NPIPB4C9JG80 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 DUT-207ENST00000559416 635 ntTSL 2 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 AC133555.4-201ENST00000569081 152 ntBASIC11.44□□□□□ -0.58
NPIPB4C9JG80 RN7SL190P-201ENST00000582519 257 ntBASIC11.44□□□□□ -0.58
NPIPB4C9JG80 AP000894.1-201ENST00000584430 520 ntBASIC11.44□□□□□ -0.58
NPIPB4C9JG80 AL606495.2-201ENST00000605867 535 ntBASIC11.44□□□□□ -0.58
NPIPB4C9JG80 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 PLS3-210ENST00000626746 216 ntTSL 4 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 LINC00840-201ENST00000431737 1974 ntTSL 2 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 FILIP1L-203ENST00000383694 3280 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 ALOX15P2-201ENST00000340858 1897 ntBASIC11.44□□□□□ -0.58
NPIPB4C9JG80 ZNF155-207ENST00000590615 1888 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 MATN2-211ENST00000521689 3554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 MYF5-201ENST00000228644 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 MRPL48-201ENST00000310614 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 PKMP1-201ENST00000455804 1523 ntBASIC11.44□□□□□ -0.58
NPIPB4C9JG80 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 SIGLEC10-209ENST00000525998 1841 ntTSL 2 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
NPIPB4C9JG80 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 NAAA-203ENST00000505594 1425 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 CICP2-201ENST00000420675 2328 ntBASIC11.43□□□□□ -0.58
NPIPB4C9JG80 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 AL590428.1-201ENST00000428865 1973 ntTSL 2 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 CYB5RL-201ENST00000287899 5777 ntTSL 3 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 RBM3-201ENST00000354480 1884 ntTSL 2 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 AL606760.3-201ENST00000569869 3591 ntBASIC11.43□□□□□ -0.58
NPIPB4C9JG80 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 SNORA52-201ENST00000362915 134 ntBASIC11.43□□□□□ -0.58
NPIPB4C9JG80 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 HLA-DPA2-205ENST00000433582 733 ntBASIC11.43□□□□□ -0.58
NPIPB4C9JG80 MAF1-204ENST00000532522 1098 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 AC055717.2-201ENST00000561864 577 ntTSL 4 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 RN7SL678P-201ENST00000579533 299 ntBASIC11.43□□□□□ -0.58
NPIPB4C9JG80 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 AP003419.4-201ENST00000616071 517 ntBASIC11.43□□□□□ -0.58
NPIPB4C9JG80 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC11.43□□□□□ -0.58
NPIPB4C9JG80 PROX1-AS1-235ENST00000628896 711 ntTSL 5 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 GGTA1P-205ENST00000495328 3478 ntTSL 2 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 CLEC17A-203ENST00000547437 2065 ntTSL 2 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
NPIPB4C9JG80 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC11.43□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms