Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 AC025419.1-210ENST00000355869 874 ntTSL 3 BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 RN7SKP79-201ENST00000363373 336 ntBASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 FLAD1-204ENST00000368428 1111 ntTSL 3 BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 CSF2RA-204ENST00000381509 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 AC008443.1-204ENST00000417281 629 ntTSL 3 BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 HNF4GP1-201ENST00000430567 1249 ntBASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 APTX-208ENST00000436040 2168 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 LINC01366-201ENST00000436248 983 ntTSL 3 BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 AC002401.1-201ENST00000451776 468 ntTSL 3 BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 AC132008.2-201ENST00000453454 956 ntTSL 4 BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 LINC00355-201ENST00000456627 1878 ntTSL 2 BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 RN7SL551P-201ENST00000480810 298 ntBASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 SSBP1-210ENST00000481508 989 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 AC138646.1-201ENST00000519983 633 ntTSL 5 BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 ANAPC11-205ENST00000571570 581 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 RN7SL377P-201ENST00000585039 278 ntBASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 AC011473.3-201ENST00000594910 485 ntTSL 5 BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 Metazoa_SRP.149-201ENST00000613165 297 ntBASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 AC005578.1-201ENST00000622962 1020 ntBASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 AC004623.1-201ENST00000624592 2127 ntBASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RIMBP3Q9UFD9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 AGGF1P10-201ENST00000635005 2191 ntBASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 NRG1-209ENST00000519301 1785 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 THEGL-202ENST00000512175 1650 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 AC008659.1-201ENST00000501834 1458 ntTSL 3 BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 RN7SKP180-201ENST00000363913 330 ntBASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 RN7SL278P-201ENST00000488843 296 ntBASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 AKR1B1P2-201ENST00000494640 934 ntBASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 NFATC4-233ENST00000557767 856 ntTSL 3 BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 LINC01387-201ENST00000584361 603 ntTSL 3 BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 RN7SL616P-201ENST00000584555 269 ntBASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 ZNF569-208ENST00000592490 579 ntTSL 3 BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 AP000435.2-201ENST00000610280 940 ntBASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 NBDY-204ENST00000637096 896 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 FAM240B-202ENST00000637691 966 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 AL022068.1-205ENST00000638138 904 ntTSL 5 BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 IGSF1-202ENST00000370900 1786 ntTSL 2 BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RIMBP3Q9UFD9 PSMA2-201ENST00000223321 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 HMGN1P35-201ENST00000303758 594 ntBASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 AC011747.2-201ENST00000418358 1036 ntTSL 5 BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 SNORD10-201ENST00000459579 142 ntBASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 AL672043.1-201ENST00000506599 395 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 SCARNA16.1-201ENST00000516133 183 ntBASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 TRIM29-213ENST00000529044 1233 ntTSL 2 BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 AP000797.3-201ENST00000537491 548 ntTSL 4 BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 NDUFA9-206ENST00000540688 642 ntTSL 2 BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 VTI1BP3-201ENST00000550220 636 ntBASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 MIR4713HG-201ENST00000559909 561 ntTSL 4 BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 AC127521.1-201ENST00000576086 854 ntTSL 3 BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 AC006027.1-201ENST00000608195 741 ntBASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 MIR8083-201ENST00000620823 89 ntBASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 PCBP1-AS1-291ENST00000626440 461 ntTSL 5 BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 USF1-203ENST00000368021 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 SERINC4-201ENST00000299969 2318 ntTSL 5 BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 AP4S1-205ENST00000554345 1491 ntTSL 3 BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RIMBP3Q9UFD9 LILRA2-202ENST00000251377 1799 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 TMPRSS11GP-201ENST00000431070 1204 ntBASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 AC022182.1-203ENST00000527672 926 ntTSL 2 BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 TP53TG3E-201ENST00000611321 1181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 BACE1-AS-201ENST00000614401 520 ntTSL 4 BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 AC022558.3-201ENST00000616598 688 ntBASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 UCHL3-206ENST00000618773 1050 ntTSL 5 BASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 BACE1-AS-202ENST00000618857 774 ntBASIC19.18■□□□□ 0.66
RIMBP3Q9UFD9 AL353770.4-202ENST00000621296 1126 ntTSL 3 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms