Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SCN2BO60939 TRPM5-201ENST00000155858 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 DDX56-204ENST00000431640 1554 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 PSAP-201ENST00000394934 2830 ntAPPRIS ALT1 TSL 5 BASIC12.35□□□□□ -0.43
SCN2BO60939 JAML-202ENST00000356289 1944 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 OFD1-201ENST00000340096 3611 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC12.35□□□□□ -0.43
SCN2BO60939 TAF11-202ENST00000420584 1465 ntTSL 2 BASIC12.35□□□□□ -0.43
SCN2BO60939 HMGCS1-201ENST00000325110 3506 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 PARGP1-201ENST00000417555 2286 ntBASIC12.35□□□□□ -0.43
SCN2BO60939 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC12.35□□□□□ -0.43
SCN2BO60939 C12orf56-201ENST00000333722 3936 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC12.35□□□□□ -0.43
SCN2BO60939 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SCN2BO60939 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC12.35□□□□□ -0.43
SCN2BO60939 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC12.35□□□□□ -0.43
SCN2BO60939 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
SCN2BO60939 Z69890.1-201ENST00000382990 339 ntBASIC12.35□□□□□ -0.43
SCN2BO60939 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC12.35□□□□□ -0.43
SCN2BO60939 SDCBP2P1-201ENST00000416115 614 ntBASIC12.35□□□□□ -0.43
SCN2BO60939 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.35□□□□□ -0.43
SCN2BO60939 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC12.35□□□□□ -0.43
SCN2BO60939 RPL35P9-201ENST00000446059 350 ntBASIC12.35□□□□□ -0.43
SCN2BO60939 RN7SL351P-201ENST00000469306 248 ntBASIC12.35□□□□□ -0.43
SCN2BO60939 CDK2AP2P2-201ENST00000478512 367 ntBASIC12.35□□□□□ -0.43
SCN2BO60939 PPIA-208ENST00000489459 907 ntTSL 2 BASIC12.35□□□□□ -0.43
SCN2BO60939 NDUFB2P1-201ENST00000506966 295 ntBASIC12.35□□□□□ -0.43
SCN2BO60939 AP002803.1-201ENST00000528836 498 ntBASIC12.35□□□□□ -0.43
SCN2BO60939 MIR4527HG-201ENST00000586905 675 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 AC005777.1-201ENST00000588332 187 ntBASIC12.35□□□□□ -0.43
SCN2BO60939 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SCN2BO60939 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 PPIA-210ENST00000620047 827 ntTSL 5 BASIC12.35□□□□□ -0.43
SCN2BO60939 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.35□□□□□ -0.43
SCN2BO60939 AL805961.1-201ENST00000642026 753 ntBASIC12.35□□□□□ -0.43
SCN2BO60939 KRT36-201ENST00000328119 1644 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SCN2BO60939 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 PCDHB6-201ENST00000231136 3266 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SCN2BO60939 AL031714.1-201ENST00000567829 2926 ntTSL 5 BASIC12.35□□□□□ -0.43
SCN2BO60939 MEFV-209ENST00000541159 1888 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC12.35□□□□□ -0.43
SCN2BO60939 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC12.35□□□□□ -0.43
SCN2BO60939 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 IL1RN-204ENST00000409052 1903 ntTSL 5 BASIC12.35□□□□□ -0.43
SCN2BO60939 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SCN2BO60939 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SCN2BO60939 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SCN2BO60939 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC12.35□□□□□ -0.43
SCN2BO60939 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
SCN2BO60939 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 AL357054.4-201ENST00000606285 2814 ntBASIC12.34□□□□□ -0.43
SCN2BO60939 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC12.34□□□□□ -0.43
SCN2BO60939 AC067852.6-201ENST00000591237 1736 ntBASIC12.34□□□□□ -0.43
SCN2BO60939 WNK1-209ENST00000537687 11232 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SCN2BO60939 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC12.34□□□□□ -0.43
SCN2BO60939 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC12.34□□□□□ -0.43
SCN2BO60939 GRIK1-203ENST00000389125 3140 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 ZNF221-205ENST00000622072 2102 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SCN2BO60939 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 AC126564.1-201ENST00000623628 2013 ntBASIC12.34□□□□□ -0.43
SCN2BO60939 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC12.34□□□□□ -0.43
SCN2BO60939 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 LCE2D-201ENST00000368784 609 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.34□□□□□ -0.43
SCN2BO60939 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
SCN2BO60939 CITED1-206ENST00000431381 941 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SCN2BO60939 CITED1-207ENST00000445983 820 ntAPPRIS P3 TSL 2 BASIC12.34□□□□□ -0.43
SCN2BO60939 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC12.34□□□□□ -0.43
SCN2BO60939 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC12.34□□□□□ -0.43
SCN2BO60939 SRP14-204ENST00000558720 780 ntTSL 2 BASIC12.34□□□□□ -0.43
SCN2BO60939 PIGH-210ENST00000560722 903 ntAPPRIS ALT1 TSL 2 BASIC12.34□□□□□ -0.43
SCN2BO60939 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.34□□□□□ -0.43
SCN2BO60939 AC006262.2-202ENST00000600152 333 ntTSL 2 BASIC12.34□□□□□ -0.43
SCN2BO60939 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC12.34□□□□□ -0.43
SCN2BO60939 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 FRG2EP-201ENST00000634243 835 ntBASIC12.34□□□□□ -0.43
SCN2BO60939 SPATA6-203ENST00000371847 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 ZNF501-201ENST00000396048 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 LRRC41-206ENST00000615587 2842 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC12.34□□□□□ -0.43
SCN2BO60939 PLAU-201ENST00000372764 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 MED27-201ENST00000292035 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SCN2BO60939 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SCN2BO60939 PMP22-203ENST00000395938 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms