Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 FAM183BP-201ENST00000409072 1595 ntBASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 DNM1P46-202ENST00000415963 882 ntBASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 ZDHHC8P1-202ENST00000418264 1403 ntBASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 RPSAP16-201ENST00000447583 821 ntBASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 CDK4P1-201ENST00000454213 828 ntBASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 RN7SL578P-201ENST00000477781 283 ntBASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 RN7SL523P-201ENST00000484401 298 ntBASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 AC007610.1-201ENST00000568130 498 ntTSL 3 BASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 AC005746.3-201ENST00000614751 393 ntBASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 DUX4L33-201ENST00000635217 958 ntBASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 ZSCAN32-203ENST00000396852 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 RHOH-219ENST00000614836 2114 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 FN1-202ENST00000336916 8435 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 CLEC10A-206ENST00000576617 1800 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 PLEKHM1P1-205ENST00000582986 5014 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 CXorf38-203ENST00000378426 4895 ntTSL 2 BASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 ADNP-203ENST00000396029 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
NPIPA3F8WFD2 NCDN-203ENST00000373253 3677 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
NPIPA3F8WFD2 TTC4-201ENST00000371281 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
NPIPA3F8WFD2 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
NPIPA3F8WFD2 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
NPIPA3F8WFD2 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
NPIPA3F8WFD2 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
NPIPA3F8WFD2 STAT3-202ENST00000389272 2615 ntTSL 2 BASIC11.9□□□□□ -0.51
NPIPA3F8WFD2 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 STRAP-202ENST00000419869 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 SFTPA1-203ENST00000428376 2141 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 SUPT20HL1-201ENST00000436466 2618 ntBASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 AC024475.2-201ENST00000312173 879 ntBASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 RNA5SP84-201ENST00000364740 107 ntBASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 ULBP3-201ENST00000367339 988 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 PEMT-204ENST00000395783 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 AC105443.1-201ENST00000433754 712 ntBASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 DUX4L31-201ENST00000446466 1136 ntBASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 AC234582.2-201ENST00000455788 568 ntTSL 3 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 AC008494.1-201ENST00000497612 796 ntBASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 PRDM2-213ENST00000503842 705 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 AC122719.1-201ENST00000507989 559 ntTSL 4 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 MBP-230ENST00000528160 584 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 AC117500.5-201ENST00000623233 527 ntBASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 CD1A-201ENST00000289429 2096 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 FPR2-203ENST00000598953 1544 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 AC022364.1-202ENST00000617468 2409 ntBASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 ADPRH-202ENST00000465513 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 SEC14L1-204ENST00000436233 5295 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 KIF13A-201ENST00000259711 5941 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 UMODL1-205ENST00000408910 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 AP003969.2-201ENST00000623739 2275 ntBASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 AC015818.9-201ENST00000591705 4582 ntBASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 NAMA-207ENST00000605707 1748 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 NMNAT2-201ENST00000287713 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NPIPA3F8WFD2 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC11.88□□□□□ -0.51
NPIPA3F8WFD2 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPA3F8WFD2 FBXO16-202ENST00000380254 1343 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
NPIPA3F8WFD2 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms