Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ACOT11-201ENST00000343744 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 AL356130.1-201ENST00000620188 1965 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 CPT1A-205ENST00000539743 2382 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CLK1P49759 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
CLK1P49759 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 GOLGA4-202ENST00000361924 7772 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 MUC1-225ENST00000612778 1836 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CLK1P49759 NANP-201ENST00000304788 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
CLK1P49759 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.4□□□□□ -0.42
CLK1P49759 SOD2-202ENST00000367054 815 ntTSL 2 BASIC12.4□□□□□ -0.42
CLK1P49759 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
CLK1P49759 AP000356.3-201ENST00000382243 753 ntBASIC12.4□□□□□ -0.42
CLK1P49759 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC12.4□□□□□ -0.42
CLK1P49759 ACTBP14-201ENST00000411655 1089 ntBASIC12.4□□□□□ -0.42
CLK1P49759 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC12.4□□□□□ -0.42
CLK1P49759 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC12.4□□□□□ -0.42
CLK1P49759 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 CSNK1G2P1-201ENST00000442675 955 ntBASIC12.4□□□□□ -0.42
CLK1P49759 KRT18P62-201ENST00000446618 1287 ntBASIC12.4□□□□□ -0.42
CLK1P49759 AC005077.3-201ENST00000449614 213 ntBASIC12.4□□□□□ -0.42
CLK1P49759 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC12.4□□□□□ -0.42
CLK1P49759 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.4□□□□□ -0.42
CLK1P49759 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC12.4□□□□□ -0.42
CLK1P49759 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC12.4□□□□□ -0.42
CLK1P49759 TNFSF13B-206ENST00000542136 495 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 BATF-202ENST00000555504 361 ntTSL 2 BASIC12.4□□□□□ -0.42
CLK1P49759 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 LINC01922-201ENST00000562582 719 ntBASIC12.4□□□□□ -0.42
CLK1P49759 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC12.4□□□□□ -0.42
CLK1P49759 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC12.4□□□□□ -0.42
CLK1P49759 AC008687.7-203ENST00000598442 551 ntTSL 4 BASIC12.4□□□□□ -0.42
CLK1P49759 AC138894.2-201ENST00000602838 371 ntBASIC12.4□□□□□ -0.42
CLK1P49759 AC140113.1-201ENST00000603467 169 ntBASIC12.4□□□□□ -0.42
CLK1P49759 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.4□□□□□ -0.42
CLK1P49759 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC12.4□□□□□ -0.42
CLK1P49759 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 CNBP-205ENST00000500450 1516 ntTSL 2 BASIC12.4□□□□□ -0.42
CLK1P49759 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 CAPN8-201ENST00000366872 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 UGT1A8-201ENST00000373450 2407 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 RALGPS2-203ENST00000367634 7512 ntTSL 2 BASIC12.4□□□□□ -0.42
CLK1P49759 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC12.4□□□□□ -0.42
CLK1P49759 AC009533.1-201ENST00000539757 3158 ntBASIC12.4□□□□□ -0.42
CLK1P49759 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
CLK1P49759 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
CLK1P49759 SMIM27-203ENST00000451672 2382 ntAPPRIS ALT2 BASIC12.4□□□□□ -0.43
CLK1P49759 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
CLK1P49759 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CLK1P49759 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CLK1P49759 AL353593.1-201ENST00000602517 3955 ntBASIC12.39□□□□□ -0.43
CLK1P49759 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC12.39□□□□□ -0.43
CLK1P49759 NLRP2-208ENST00000448584 3573 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 ERCC2-204ENST00000391945 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 ATP2C1-221ENST00000513801 3439 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC12.39□□□□□ -0.43
CLK1P49759 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC12.39□□□□□ -0.43
CLK1P49759 PSMC3IP-201ENST00000253789 1408 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 SCN8A-208ENST00000599343 5976 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
CLK1P49759 TXLNG-202ENST00000398155 3998 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 CICP19-201ENST00000632944 2357 ntBASIC12.39□□□□□ -0.43
CLK1P49759 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 RNVU1-8-201ENST00000364272 125 ntBASIC12.39□□□□□ -0.43
CLK1P49759 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC12.39□□□□□ -0.43
CLK1P49759 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC12.39□□□□□ -0.43
CLK1P49759 OR52M2P-201ENST00000414298 959 ntBASIC12.39□□□□□ -0.43
CLK1P49759 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC12.39□□□□□ -0.43
CLK1P49759 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.39□□□□□ -0.43
CLK1P49759 HPGD-203ENST00000422112 805 ntTSL 2 BASIC12.39□□□□□ -0.43
CLK1P49759 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC12.39□□□□□ -0.43
CLK1P49759 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CLK1P49759 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 AL359979.2-201ENST00000435108 613 ntTSL 3 BASIC12.39□□□□□ -0.43
CLK1P49759 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.39□□□□□ -0.43
CLK1P49759 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC12.39□□□□□ -0.43
CLK1P49759 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
CLK1P49759 RN7SKP155-201ENST00000516031 288 ntBASIC12.39□□□□□ -0.43
CLK1P49759 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC12.39□□□□□ -0.43
CLK1P49759 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC12.39□□□□□ -0.43
CLK1P49759 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.39□□□□□ -0.43
CLK1P49759 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC12.39□□□□□ -0.43
CLK1P49759 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC12.39□□□□□ -0.43
CLK1P49759 AC008158.1-201ENST00000578759 3668 ntBASIC12.39□□□□□ -0.43
CLK1P49759 ACTN2-201ENST00000366578 4863 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CLK1P49759 FAM131A-211ENST00000639617 4450 ntTSL 5 BASIC12.39□□□□□ -0.43
CLK1P49759 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms