Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ALX3O95076 CTAGE7P-201ENST00000435712 2436 ntBASIC11.7□□□□□ -0.54
ALX3O95076 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC11.7□□□□□ -0.54
ALX3O95076 ABL2-202ENST00000367623 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ALX3O95076 ABI1-203ENST00000376137 3467 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
ALX3O95076 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ALX3O95076 PRAMEF27-201ENST00000436041 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ALX3O95076 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
ALX3O95076 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
ALX3O95076 CNTROB-202ENST00000563694 3705 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
ALX3O95076 METTL13-201ENST00000361735 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ALX3O95076 CCDC112-201ENST00000379611 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
ALX3O95076 RBFOX1-224ENST00000641259 3651 ntBASIC11.7□□□□□ -0.54
ALX3O95076 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
ALX3O95076 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC11.69□□□□□ -0.54
ALX3O95076 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
ALX3O95076 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
ALX3O95076 STX3-207ENST00000633708 3111 ntTSL 5 BASIC11.69□□□□□ -0.54
ALX3O95076 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 CRP-201ENST00000255030 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 LINC01744-201ENST00000457698 2042 ntTSL 2 BASIC11.69□□□□□ -0.54
ALX3O95076 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
ALX3O95076 MED24-212ENST00000501516 3037 ntTSL 5 BASIC11.69□□□□□ -0.54
ALX3O95076 AC092117.2-201ENST00000623937 1659 ntBASIC11.69□□□□□ -0.54
ALX3O95076 NFATC1-202ENST00000318065 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC11.69□□□□□ -0.54
ALX3O95076 ARHGEF3-213ENST00000496106 1994 ntTSL 2 BASIC11.69□□□□□ -0.54
ALX3O95076 ZNF595-203ENST00000608255 1999 ntTSL 2 BASIC11.69□□□□□ -0.54
ALX3O95076 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC11.69□□□□□ -0.54
ALX3O95076 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC11.69□□□□□ -0.54
ALX3O95076 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC11.69□□□□□ -0.54
ALX3O95076 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC11.69□□□□□ -0.54
ALX3O95076 MYOZ3-205ENST00000520112 605 ntTSL 4 BASIC11.69□□□□□ -0.54
ALX3O95076 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC11.69□□□□□ -0.54
ALX3O95076 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC11.69□□□□□ -0.54
ALX3O95076 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC11.69□□□□□ -0.54
ALX3O95076 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC11.69□□□□□ -0.54
ALX3O95076 SIGLEC22P-201ENST00000599104 714 ntBASIC11.69□□□□□ -0.54
ALX3O95076 KC6-205ENST00000599934 556 ntTSL 4 BASIC11.69□□□□□ -0.54
ALX3O95076 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC11.69□□□□□ -0.54
ALX3O95076 AC009560.1-201ENST00000620208 434 ntBASIC11.69□□□□□ -0.54
ALX3O95076 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 AL359641.1-201ENST00000412509 1558 ntBASIC11.69□□□□□ -0.54
ALX3O95076 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 AC026904.3-201ENST00000636550 1530 ntTSL 5 BASIC11.69□□□□□ -0.54
ALX3O95076 OAS1-208ENST00000551241 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 RHD-210ENST00000622561 3007 ntTSL 5 BASIC11.69□□□□□ -0.54
ALX3O95076 CDCA2-202ENST00000380665 3565 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 ST5-230ENST00000530438 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 SHMT2-205ENST00000553474 1765 ntTSL 2 BASIC11.69□□□□□ -0.54
ALX3O95076 WDR47-201ENST00000357672 4144 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 CCT8-201ENST00000286788 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
ALX3O95076 CHMP3-201ENST00000263856 3171 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 PRIMA1-202ENST00000393140 3711 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
ALX3O95076 NLRC3-201ENST00000324659 3414 ntTSL 5 BASIC11.69□□□□□ -0.54
ALX3O95076 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
ALX3O95076 CELF2-AS1-201ENST00000379256 2468 ntTSL 2 BASIC11.68□□□□□ -0.54
ALX3O95076 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALX3O95076 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
ALX3O95076 GUCY1A3-205ENST00000506455 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALX3O95076 LINC01119-202ENST00000468141 2157 ntTSL 2 BASIC11.68□□□□□ -0.54
ALX3O95076 ARHGEF9-218ENST00000624843 2154 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ALX3O95076 SPICE1-201ENST00000295872 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALX3O95076 KCNK5-201ENST00000359534 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALX3O95076 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC11.68□□□□□ -0.54
ALX3O95076 NDUFAF6-201ENST00000396111 1869 ntTSL 5 BASIC11.68□□□□□ -0.54
ALX3O95076 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALX3O95076 GOLGA2P1-201ENST00000512938 2906 ntBASIC11.68□□□□□ -0.54
ALX3O95076 CHAT-202ENST00000339797 2124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALX3O95076 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
ALX3O95076 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALX3O95076 LINC01913-201ENST00000398796 1810 ntTSL 2 BASIC11.68□□□□□ -0.54
ALX3O95076 ECM1-202ENST00000369047 2070 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALX3O95076 ZNF627-201ENST00000361113 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALX3O95076 ZBTB1-203ENST00000554015 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALX3O95076 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALX3O95076 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
ALX3O95076 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALX3O95076 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
ALX3O95076 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC11.68□□□□□ -0.54
ALX3O95076 HNRNPA1P33-201ENST00000421426 561 ntBASIC11.68□□□□□ -0.54
ALX3O95076 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
ALX3O95076 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
ALX3O95076 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC11.68□□□□□ -0.54
ALX3O95076 AC026320.2-201ENST00000434379 478 ntBASIC11.68□□□□□ -0.54
ALX3O95076 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC11.68□□□□□ -0.54
ALX3O95076 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC11.68□□□□□ -0.54
ALX3O95076 AC018638.5-201ENST00000450885 754 ntBASIC11.68□□□□□ -0.54
ALX3O95076 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC11.68□□□□□ -0.54
ALX3O95076 SCARNA12-201ENST00000459155 270 ntBASIC11.68□□□□□ -0.54
ALX3O95076 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms