Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC26.22■■□□□ 1.79
DDX49Q9Y6V7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC26.21■■□□□ 1.79
DDX49Q9Y6V7 PKD1P6-201ENST00000343738 4769 ntBASIC26.21■■□□□ 1.79
DDX49Q9Y6V7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
DDX49Q9Y6V7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
DDX49Q9Y6V7 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC26.21■■□□□ 1.79
DDX49Q9Y6V7 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC26.21■■□□□ 1.79
DDX49Q9Y6V7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
DDX49Q9Y6V7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
DDX49Q9Y6V7 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.2■■□□□ 1.79
DDX49Q9Y6V7 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC26.2■■□□□ 1.79
DDX49Q9Y6V7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
DDX49Q9Y6V7 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC26.2■■□□□ 1.78
DDX49Q9Y6V7 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
DDX49Q9Y6V7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.78
DDX49Q9Y6V7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.2■■□□□ 1.78
DDX49Q9Y6V7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
DDX49Q9Y6V7 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
DDX49Q9Y6V7 AL136162.1-201ENST00000607711 1078 ntBASIC26.2■■□□□ 1.78
DDX49Q9Y6V7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
DDX49Q9Y6V7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
DDX49Q9Y6V7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.2■■□□□ 1.78
DDX49Q9Y6V7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX49Q9Y6V7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX49Q9Y6V7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX49Q9Y6V7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
DDX49Q9Y6V7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.19■■□□□ 1.78
DDX49Q9Y6V7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX49Q9Y6V7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.19■■□□□ 1.78
DDX49Q9Y6V7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX49Q9Y6V7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
DDX49Q9Y6V7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC26.19■■□□□ 1.78
DDX49Q9Y6V7 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.19■■□□□ 1.78
DDX49Q9Y6V7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
DDX49Q9Y6V7 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC26.18■■□□□ 1.78
DDX49Q9Y6V7 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.18■■□□□ 1.78
DDX49Q9Y6V7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
DDX49Q9Y6V7 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.18■■□□□ 1.78
DDX49Q9Y6V7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC26.18■■□□□ 1.78
DDX49Q9Y6V7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC26.18■■□□□ 1.78
DDX49Q9Y6V7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
DDX49Q9Y6V7 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.18■■□□□ 1.78
DDX49Q9Y6V7 AC024257.2-201ENST00000549699 147 ntBASIC26.18■■□□□ 1.78
DDX49Q9Y6V7 AL137060.1-201ENST00000618151 2648 ntBASIC26.18■■□□□ 1.78
DDX49Q9Y6V7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.17■■□□□ 1.78
DDX49Q9Y6V7 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX49Q9Y6V7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX49Q9Y6V7 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
DDX49Q9Y6V7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
DDX49Q9Y6V7 SRD5A1P1-201ENST00000442297 786 ntBASIC26.17■■□□□ 1.78
DDX49Q9Y6V7 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
DDX49Q9Y6V7 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC26.17■■□□□ 1.78
DDX49Q9Y6V7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC26.17■■□□□ 1.78
DDX49Q9Y6V7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX49Q9Y6V7 AC242852.2-201ENST00000615738 1807 ntBASIC26.16■■□□□ 1.78
DDX49Q9Y6V7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX49Q9Y6V7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC26.16■■□□□ 1.78
DDX49Q9Y6V7 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.16■■□□□ 1.78
DDX49Q9Y6V7 AC133561.4-201ENST00000566112 224 ntBASIC26.16■■□□□ 1.78
DDX49Q9Y6V7 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX49Q9Y6V7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.16■■□□□ 1.78
DDX49Q9Y6V7 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC26.16■■□□□ 1.78
DDX49Q9Y6V7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
DDX49Q9Y6V7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.16■■□□□ 1.78
DDX49Q9Y6V7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
DDX49Q9Y6V7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.78
DDX49Q9Y6V7 AC005703.6-201ENST00000623265 1329 ntBASIC26.14■■□□□ 1.78
DDX49Q9Y6V7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.78
DDX49Q9Y6V7 GUK1-205ENST00000366722 850 ntTSL 3 BASIC26.14■■□□□ 1.78
DDX49Q9Y6V7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.14■■□□□ 1.78
DDX49Q9Y6V7 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.14■■□□□ 1.78
DDX49Q9Y6V7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
DDX49Q9Y6V7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC26.14■■□□□ 1.77
DDX49Q9Y6V7 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
DDX49Q9Y6V7 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
DDX49Q9Y6V7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
DDX49Q9Y6V7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
DDX49Q9Y6V7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
DDX49Q9Y6V7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
DDX49Q9Y6V7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
DDX49Q9Y6V7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
DDX49Q9Y6V7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
DDX49Q9Y6V7 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms