Protein–RNA interactions for Protein: Q9Y6H6

KCNE3, Potassium voltage-gated channel subfamily E member 3, humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNE3Q9Y6H6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
KCNE3Q9Y6H6 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
KCNE3Q9Y6H6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 AC241377.3-202ENST00000626088 1088 ntBASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 AC241585.3-202ENST00000628937 1088 ntBASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 AC245100.8-202ENST00000629247 1058 ntBASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 LINC00565-201ENST00000562710 2331 ntBASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
KCNE3Q9Y6H6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNE3Q9Y6H6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNE3Q9Y6H6 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNE3Q9Y6H6 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
KCNE3Q9Y6H6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNE3Q9Y6H6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
KCNE3Q9Y6H6 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
KCNE3Q9Y6H6 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.44■□□□□ 0.86
KCNE3Q9Y6H6 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.44■□□□□ 0.86
KCNE3Q9Y6H6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
KCNE3Q9Y6H6 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.44■□□□□ 0.86
KCNE3Q9Y6H6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 MIR4466-201ENST00000606121 54 ntBASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 pRNA.6-201ENST00000610482 90 ntBASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 pRNA.5-201ENST00000612139 90 ntBASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 pRNA.11-201ENST00000618423 90 ntBASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 pRNA.13-201ENST00000619112 90 ntBASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
KCNE3Q9Y6H6 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNE3Q9Y6H6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNE3Q9Y6H6 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNE3Q9Y6H6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
KCNE3Q9Y6H6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNE3Q9Y6H6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNE3Q9Y6H6 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.42■□□□□ 0.86
KCNE3Q9Y6H6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.42■□□□□ 0.86
KCNE3Q9Y6H6 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
KCNE3Q9Y6H6 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNE3Q9Y6H6 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNE3Q9Y6H6 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
KCNE3Q9Y6H6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.42■□□□□ 0.86
KCNE3Q9Y6H6 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
KCNE3Q9Y6H6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
KCNE3Q9Y6H6 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
KCNE3Q9Y6H6 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
KCNE3Q9Y6H6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNE3Q9Y6H6 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNE3Q9Y6H6 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNE3Q9Y6H6 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
KCNE3Q9Y6H6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms