Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.51■■□□□ 1.03
PCDHB11Q9Y5F2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PCDHB11Q9Y5F2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHB11Q9Y5F2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHB11Q9Y5F2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.5■■□□□ 1.03
PCDHB11Q9Y5F2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB11Q9Y5F2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHB11Q9Y5F2 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHB11Q9Y5F2 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.5■■□□□ 1.03
PCDHB11Q9Y5F2 BX842568.3-201ENST00000418104 571 ntBASIC21.5■■□□□ 1.03
PCDHB11Q9Y5F2 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHB11Q9Y5F2 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC21.5■■□□□ 1.03
PCDHB11Q9Y5F2 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB11Q9Y5F2 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB11Q9Y5F2 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC21.5■■□□□ 1.03
PCDHB11Q9Y5F2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB11Q9Y5F2 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB11Q9Y5F2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB11Q9Y5F2 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
PCDHB11Q9Y5F2 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 pRNA.6-201ENST00000610482 90 ntBASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 pRNA.5-201ENST00000612139 90 ntBASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 pRNA.11-201ENST00000618423 90 ntBASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 pRNA.13-201ENST00000619112 90 ntBASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDHB11Q9Y5F2 DUSP8P3-201ENST00000399571 1760 ntBASIC21.48■■□□□ 1.03
PCDHB11Q9Y5F2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB11Q9Y5F2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHB11Q9Y5F2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDHB11Q9Y5F2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB11Q9Y5F2 AL499627.2-201ENST00000606283 725 ntBASIC21.48■■□□□ 1.03
PCDHB11Q9Y5F2 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.48■■□□□ 1.03
PCDHB11Q9Y5F2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.48■■□□□ 1.03
PCDHB11Q9Y5F2 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
PCDHB11Q9Y5F2 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDHB11Q9Y5F2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB11Q9Y5F2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHB11Q9Y5F2 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB11Q9Y5F2 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB11Q9Y5F2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB11Q9Y5F2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB11Q9Y5F2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB11Q9Y5F2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.47■■□□□ 1.03
PCDHB11Q9Y5F2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDHB11Q9Y5F2 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDHB11Q9Y5F2 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB11Q9Y5F2 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDHB11Q9Y5F2 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHB11Q9Y5F2 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB11Q9Y5F2 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PCDHB11Q9Y5F2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PCDHB11Q9Y5F2 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB11Q9Y5F2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB11Q9Y5F2 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHB11Q9Y5F2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB11Q9Y5F2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
PCDHB11Q9Y5F2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDHB11Q9Y5F2 AC079834.2-201ENST00000609776 1949 ntBASIC21.46■■□□□ 1.03
PCDHB11Q9Y5F2 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
PCDHB11Q9Y5F2 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDHB11Q9Y5F2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.45■■□□□ 1.03
PCDHB11Q9Y5F2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
PCDHB11Q9Y5F2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHB11Q9Y5F2 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB11Q9Y5F2 AC126544.1-201ENST00000580842 1059 ntBASIC21.45■■□□□ 1.02
PCDHB11Q9Y5F2 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PCDHB11Q9Y5F2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHB11Q9Y5F2 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
PCDHB11Q9Y5F2 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
PCDHB11Q9Y5F2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHB11Q9Y5F2 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.45■■□□□ 1.02
PCDHB11Q9Y5F2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
PCDHB11Q9Y5F2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB11Q9Y5F2 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB11Q9Y5F2 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB11Q9Y5F2 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB11Q9Y5F2 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB11Q9Y5F2 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
PCDHB11Q9Y5F2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.44■■□□□ 1.02
PCDHB11Q9Y5F2 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms