Protein–RNA interactions for Protein: Q9UN73

PCDHA6, Protocadherin alpha-6, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA6Q9UN73 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.26■■□□□ 1.63
PCDHA6Q9UN73 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA6Q9UN73 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
PCDHA6Q9UN73 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA6Q9UN73 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
PCDHA6Q9UN73 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC25.26■■□□□ 1.63
PCDHA6Q9UN73 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC25.26■■□□□ 1.63
PCDHA6Q9UN73 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC25.26■■□□□ 1.63
PCDHA6Q9UN73 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHA6Q9UN73 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
PCDHA6Q9UN73 MPST-208ENST00000628507 698 ntTSL 5 BASIC25.25■■□□□ 1.63
PCDHA6Q9UN73 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
PCDHA6Q9UN73 C1orf229-201ENST00000623686 2258 ntBASIC25.25■■□□□ 1.63
PCDHA6Q9UN73 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
PCDHA6Q9UN73 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
PCDHA6Q9UN73 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
PCDHA6Q9UN73 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC25.24■■□□□ 1.63
PCDHA6Q9UN73 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC25.24■■□□□ 1.63
PCDHA6Q9UN73 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC25.24■■□□□ 1.63
PCDHA6Q9UN73 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC25.24■■□□□ 1.63
PCDHA6Q9UN73 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC25.24■■□□□ 1.63
PCDHA6Q9UN73 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC25.24■■□□□ 1.63
PCDHA6Q9UN73 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
PCDHA6Q9UN73 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
PCDHA6Q9UN73 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA6Q9UN73 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA6Q9UN73 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC25.23■■□□□ 1.63
PCDHA6Q9UN73 STX4-202ENST00000394998 1498 ntTSL 2 BASIC25.23■■□□□ 1.63
PCDHA6Q9UN73 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA6Q9UN73 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA6Q9UN73 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC25.23■■□□□ 1.63
PCDHA6Q9UN73 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA6Q9UN73 AC126544.1-201ENST00000580842 1059 ntBASIC25.23■■□□□ 1.63
PCDHA6Q9UN73 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
PCDHA6Q9UN73 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
PCDHA6Q9UN73 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.22■■□□□ 1.63
PCDHA6Q9UN73 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHA6Q9UN73 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHA6Q9UN73 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
PCDHA6Q9UN73 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.22■■□□□ 1.63
PCDHA6Q9UN73 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
PCDHA6Q9UN73 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA6Q9UN73 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA6Q9UN73 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA6Q9UN73 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA6Q9UN73 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA6Q9UN73 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
PCDHA6Q9UN73 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA6Q9UN73 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA6Q9UN73 GUK1-205ENST00000366722 850 ntTSL 3 BASIC25.21■■□□□ 1.63
PCDHA6Q9UN73 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
PCDHA6Q9UN73 GRAMD4P2-201ENST00000423297 1097 ntBASIC25.21■■□□□ 1.63
PCDHA6Q9UN73 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC25.21■■□□□ 1.63
PCDHA6Q9UN73 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA6Q9UN73 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
PCDHA6Q9UN73 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC25.21■■□□□ 1.63
PCDHA6Q9UN73 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC25.2■■□□□ 1.63
PCDHA6Q9UN73 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHA6Q9UN73 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHA6Q9UN73 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC25.2■■□□□ 1.62
PCDHA6Q9UN73 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHA6Q9UN73 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
PCDHA6Q9UN73 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC25.2■■□□□ 1.62
PCDHA6Q9UN73 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
PCDHA6Q9UN73 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHA6Q9UN73 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
PCDHA6Q9UN73 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC25.19■■□□□ 1.62
PCDHA6Q9UN73 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
PCDHA6Q9UN73 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHA6Q9UN73 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHA6Q9UN73 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.19■■□□□ 1.62
PCDHA6Q9UN73 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
PCDHA6Q9UN73 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.18■■□□□ 1.62
PCDHA6Q9UN73 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA6Q9UN73 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.18■■□□□ 1.62
PCDHA6Q9UN73 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.18■■□□□ 1.62
PCDHA6Q9UN73 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
PCDHA6Q9UN73 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC25.18■■□□□ 1.62
PCDHA6Q9UN73 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
PCDHA6Q9UN73 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHA6Q9UN73 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
PCDHA6Q9UN73 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.17■■□□□ 1.62
PCDHA6Q9UN73 LTK-203ENST00000453182 2412 ntTSL 2 BASIC25.17■■□□□ 1.62
PCDHA6Q9UN73 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC25.17■■□□□ 1.62
PCDHA6Q9UN73 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHA6Q9UN73 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
PCDHA6Q9UN73 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA6Q9UN73 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC25.16■■□□□ 1.62
PCDHA6Q9UN73 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA6Q9UN73 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDHA6Q9UN73 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA6Q9UN73 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA6Q9UN73 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC25.16■■□□□ 1.62
PCDHA6Q9UN73 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC25.16■■□□□ 1.62
PCDHA6Q9UN73 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
PCDHA6Q9UN73 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC25.16■■□□□ 1.62
PCDHA6Q9UN73 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC25.15■■□□□ 1.62
PCDHA6Q9UN73 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
PCDHA6Q9UN73 AC133561.1-201ENST00000568600 2415 ntBASIC25.15■■□□□ 1.62
PCDHA6Q9UN73 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms