Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT11Q9UKZ1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
CNOT11Q9UKZ1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT11Q9UKZ1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT11Q9UKZ1 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT11Q9UKZ1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.06■□□□□ 0.96
CNOT11Q9UKZ1 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT11Q9UKZ1 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT11Q9UKZ1 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.06■□□□□ 0.96
CNOT11Q9UKZ1 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT11Q9UKZ1 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CNOT11Q9UKZ1 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
CNOT11Q9UKZ1 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
CNOT11Q9UKZ1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT11Q9UKZ1 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT11Q9UKZ1 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.05■□□□□ 0.96
CNOT11Q9UKZ1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.05■□□□□ 0.96
CNOT11Q9UKZ1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.05■□□□□ 0.96
CNOT11Q9UKZ1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC21.05■□□□□ 0.96
CNOT11Q9UKZ1 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT11Q9UKZ1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CNOT11Q9UKZ1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CNOT11Q9UKZ1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
CNOT11Q9UKZ1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.05■□□□□ 0.96
CNOT11Q9UKZ1 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT11Q9UKZ1 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT11Q9UKZ1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT11Q9UKZ1 AL117332.1-201ENST00000622628 974 ntBASIC21.04■□□□□ 0.96
CNOT11Q9UKZ1 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CNOT11Q9UKZ1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CNOT11Q9UKZ1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
CNOT11Q9UKZ1 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT11Q9UKZ1 AC026310.3-201ENST00000625186 2373 ntBASIC21.02■□□□□ 0.96
CNOT11Q9UKZ1 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
CNOT11Q9UKZ1 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT11Q9UKZ1 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT11Q9UKZ1 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT11Q9UKZ1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.02■□□□□ 0.96
CNOT11Q9UKZ1 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT11Q9UKZ1 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CNOT11Q9UKZ1 PALM-208ENST00000592155 2272 ntTSL 4 BASIC21.02■□□□□ 0.95
CNOT11Q9UKZ1 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT11Q9UKZ1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT11Q9UKZ1 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT11Q9UKZ1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.01■□□□□ 0.95
CNOT11Q9UKZ1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.01■□□□□ 0.95
CNOT11Q9UKZ1 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT11Q9UKZ1 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.01■□□□□ 0.95
CNOT11Q9UKZ1 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.01■□□□□ 0.95
CNOT11Q9UKZ1 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.01■□□□□ 0.95
CNOT11Q9UKZ1 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.01■□□□□ 0.95
CNOT11Q9UKZ1 MIR3621-201ENST00000580529 85 ntBASIC21.01■□□□□ 0.95
CNOT11Q9UKZ1 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
CNOT11Q9UKZ1 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CNOT11Q9UKZ1 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CNOT11Q9UKZ1 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21■□□□□ 0.95
CNOT11Q9UKZ1 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21■□□□□ 0.95
CNOT11Q9UKZ1 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21■□□□□ 0.95
CNOT11Q9UKZ1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21■□□□□ 0.95
CNOT11Q9UKZ1 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC21■□□□□ 0.95
CNOT11Q9UKZ1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CNOT11Q9UKZ1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.99■□□□□ 0.95
CNOT11Q9UKZ1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CNOT11Q9UKZ1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT11Q9UKZ1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT11Q9UKZ1 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT11Q9UKZ1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT11Q9UKZ1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.99■□□□□ 0.95
CNOT11Q9UKZ1 AL356740.2-201ENST00000601559 647 ntBASIC20.99■□□□□ 0.95
CNOT11Q9UKZ1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CNOT11Q9UKZ1 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT11Q9UKZ1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT11Q9UKZ1 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CNOT11Q9UKZ1 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
CNOT11Q9UKZ1 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
CNOT11Q9UKZ1 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.98■□□□□ 0.95
CNOT11Q9UKZ1 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT11Q9UKZ1 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.98■□□□□ 0.95
CNOT11Q9UKZ1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CNOT11Q9UKZ1 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.98■□□□□ 0.95
CNOT11Q9UKZ1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms