Protein–RNA interactions for Protein: Q9P000

COMMD9, COMM domain-containing protein 9, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9Q9P000 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
COMMD9Q9P000 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD9Q9P000 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD9Q9P000 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD9Q9P000 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD9Q9P000 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD9Q9P000 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC18.63■□□□□ 0.57
COMMD9Q9P000 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD9Q9P000 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
COMMD9Q9P000 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COMMD9Q9P000 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
COMMD9Q9P000 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
COMMD9Q9P000 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD9Q9P000 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD9Q9P000 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD9Q9P000 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
COMMD9Q9P000 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD9Q9P000 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD9Q9P000 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
COMMD9Q9P000 SPCS2P3-201ENST00000500401 656 ntBASIC18.62■□□□□ 0.57
COMMD9Q9P000 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD9Q9P000 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD9Q9P000 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.62■□□□□ 0.57
COMMD9Q9P000 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD9Q9P000 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD9Q9P000 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.62■□□□□ 0.57
COMMD9Q9P000 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD9Q9P000 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD9Q9P000 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD9Q9P000 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
COMMD9Q9P000 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD9Q9P000 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD9Q9P000 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
COMMD9Q9P000 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD9Q9P000 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD9Q9P000 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD9Q9P000 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC18.61■□□□□ 0.57
COMMD9Q9P000 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.61■□□□□ 0.57
COMMD9Q9P000 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD9Q9P000 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
COMMD9Q9P000 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD9Q9P000 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
COMMD9Q9P000 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD9Q9P000 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD9Q9P000 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
COMMD9Q9P000 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD9Q9P000 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
COMMD9Q9P000 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD9Q9P000 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD9Q9P000 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD9Q9P000 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
COMMD9Q9P000 HYI-213ENST00000583037 1322 ntTSL 5 BASIC18.6■□□□□ 0.57
COMMD9Q9P000 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
COMMD9Q9P000 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.6■□□□□ 0.57
COMMD9Q9P000 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
COMMD9Q9P000 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD9Q9P000 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD9Q9P000 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.59■□□□□ 0.57
COMMD9Q9P000 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.59■□□□□ 0.57
COMMD9Q9P000 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
COMMD9Q9P000 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
COMMD9Q9P000 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD9Q9P000 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
COMMD9Q9P000 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD9Q9P000 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.58■□□□□ 0.57
COMMD9Q9P000 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD9Q9P000 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
COMMD9Q9P000 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC18.58■□□□□ 0.56
COMMD9Q9P000 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.58■□□□□ 0.56
COMMD9Q9P000 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.58■□□□□ 0.56
COMMD9Q9P000 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.58■□□□□ 0.56
COMMD9Q9P000 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.58■□□□□ 0.56
COMMD9Q9P000 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
COMMD9Q9P000 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.58■□□□□ 0.56
COMMD9Q9P000 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.58■□□□□ 0.56
COMMD9Q9P000 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
COMMD9Q9P000 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
COMMD9Q9P000 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.57■□□□□ 0.56
COMMD9Q9P000 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
COMMD9Q9P000 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD9Q9P000 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD9Q9P000 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD9Q9P000 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD9Q9P000 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD9Q9P000 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
COMMD9Q9P000 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD9Q9P000 DUX4L9-201ENST00000449051 1259 ntBASIC18.57■□□□□ 0.56
COMMD9Q9P000 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD9Q9P000 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD9Q9P000 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD9Q9P000 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD9Q9P000 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD9Q9P000 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD9Q9P000 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD9Q9P000 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
COMMD9Q9P000 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
COMMD9Q9P000 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC18.57■□□□□ 0.56
COMMD9Q9P000 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.56■□□□□ 0.56
COMMD9Q9P000 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
COMMD9Q9P000 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms