Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
SPHK1Q9NYA1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.21■□□□□ 0.99
SPHK1Q9NYA1 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.21■□□□□ 0.99
SPHK1Q9NYA1 TSPY26P-201ENST00000476365 1326 ntBASIC21.21■□□□□ 0.99
SPHK1Q9NYA1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
SPHK1Q9NYA1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.21■□□□□ 0.99
SPHK1Q9NYA1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
SPHK1Q9NYA1 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SPHK1Q9NYA1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
SPHK1Q9NYA1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SPHK1Q9NYA1 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.99
SPHK1Q9NYA1 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPHK1Q9NYA1 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.98
SPHK1Q9NYA1 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SPHK1Q9NYA1 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPHK1Q9NYA1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.2■□□□□ 0.98
SPHK1Q9NYA1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SPHK1Q9NYA1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.2■□□□□ 0.98
SPHK1Q9NYA1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.2■□□□□ 0.98
SPHK1Q9NYA1 AL031602.1-201ENST00000633169 911 ntBASIC21.2■□□□□ 0.98
SPHK1Q9NYA1 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPHK1Q9NYA1 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SPHK1Q9NYA1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPHK1Q9NYA1 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPHK1Q9NYA1 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.19■□□□□ 0.98
SPHK1Q9NYA1 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.19■□□□□ 0.98
SPHK1Q9NYA1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPHK1Q9NYA1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
SPHK1Q9NYA1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC21.19■□□□□ 0.98
SPHK1Q9NYA1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.19■□□□□ 0.98
SPHK1Q9NYA1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.19■□□□□ 0.98
SPHK1Q9NYA1 IGHV3-19-201ENST00000521488 291 ntBASIC21.19■□□□□ 0.98
SPHK1Q9NYA1 AP005435.1-201ENST00000529293 1178 ntBASIC21.19■□□□□ 0.98
SPHK1Q9NYA1 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SPHK1Q9NYA1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SPHK1Q9NYA1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC21.19■□□□□ 0.98
SPHK1Q9NYA1 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SPHK1Q9NYA1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.19■□□□□ 0.98
SPHK1Q9NYA1 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPHK1Q9NYA1 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
SPHK1Q9NYA1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPHK1Q9NYA1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC21.18■□□□□ 0.98
SPHK1Q9NYA1 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPHK1Q9NYA1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.18■□□□□ 0.98
SPHK1Q9NYA1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SPHK1Q9NYA1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.18■□□□□ 0.98
SPHK1Q9NYA1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.18■□□□□ 0.98
SPHK1Q9NYA1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.18■□□□□ 0.98
SPHK1Q9NYA1 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPHK1Q9NYA1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
SPHK1Q9NYA1 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
SPHK1Q9NYA1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SPHK1Q9NYA1 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SPHK1Q9NYA1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.18■□□□□ 0.98
SPHK1Q9NYA1 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPHK1Q9NYA1 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.17■□□□□ 0.98
SPHK1Q9NYA1 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SPHK1Q9NYA1 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.17■□□□□ 0.98
SPHK1Q9NYA1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.17■□□□□ 0.98
SPHK1Q9NYA1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPHK1Q9NYA1 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SPHK1Q9NYA1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.17■□□□□ 0.98
SPHK1Q9NYA1 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPHK1Q9NYA1 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.17■□□□□ 0.98
SPHK1Q9NYA1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.17■□□□□ 0.98
SPHK1Q9NYA1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPHK1Q9NYA1 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SPHK1Q9NYA1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.17■□□□□ 0.98
SPHK1Q9NYA1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC21.17■□□□□ 0.98
SPHK1Q9NYA1 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
SPHK1Q9NYA1 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.17■□□□□ 0.98
SPHK1Q9NYA1 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
SPHK1Q9NYA1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPHK1Q9NYA1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SPHK1Q9NYA1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SPHK1Q9NYA1 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SPHK1Q9NYA1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SPHK1Q9NYA1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPHK1Q9NYA1 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SPHK1Q9NYA1 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.15■□□□□ 0.98
SPHK1Q9NYA1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms