Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
LIN7CQ9NUP9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC18.23■□□□□ 0.51
LIN7CQ9NUP9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 AC092053.2-201ENST00000640557 1818 ntBASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 KRT16P3-201ENST00000439127 1283 ntBASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LIN7CQ9NUP9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LIN7CQ9NUP9 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LIN7CQ9NUP9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LIN7CQ9NUP9 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LIN7CQ9NUP9 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LIN7CQ9NUP9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LIN7CQ9NUP9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC18.21■□□□□ 0.51
LIN7CQ9NUP9 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LIN7CQ9NUP9 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
LIN7CQ9NUP9 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.21■□□□□ 0.51
LIN7CQ9NUP9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.21■□□□□ 0.51
LIN7CQ9NUP9 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
LIN7CQ9NUP9 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LIN7CQ9NUP9 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
LIN7CQ9NUP9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LIN7CQ9NUP9 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
LIN7CQ9NUP9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LIN7CQ9NUP9 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LIN7CQ9NUP9 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LIN7CQ9NUP9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.2■□□□□ 0.5
LIN7CQ9NUP9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LIN7CQ9NUP9 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LIN7CQ9NUP9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.2■□□□□ 0.5
LIN7CQ9NUP9 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LIN7CQ9NUP9 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LIN7CQ9NUP9 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LIN7CQ9NUP9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIN7CQ9NUP9 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIN7CQ9NUP9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIN7CQ9NUP9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
LIN7CQ9NUP9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIN7CQ9NUP9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LIN7CQ9NUP9 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIN7CQ9NUP9 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.19■□□□□ 0.5
LIN7CQ9NUP9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.19■□□□□ 0.5
LIN7CQ9NUP9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIN7CQ9NUP9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LIN7CQ9NUP9 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC18.19■□□□□ 0.5
LIN7CQ9NUP9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LIN7CQ9NUP9 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LIN7CQ9NUP9 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LIN7CQ9NUP9 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LIN7CQ9NUP9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LIN7CQ9NUP9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LIN7CQ9NUP9 AL356441.2-201ENST00000443009 864 ntBASIC18.18■□□□□ 0.5
LIN7CQ9NUP9 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.18■□□□□ 0.5
LIN7CQ9NUP9 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LIN7CQ9NUP9 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LIN7CQ9NUP9 AC144652.1-201ENST00000609974 1624 ntBASIC18.18■□□□□ 0.5
LIN7CQ9NUP9 AC139530.1-201ENST00000575312 1977 ntBASIC18.18■□□□□ 0.5
LIN7CQ9NUP9 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LIN7CQ9NUP9 C11orf96-202ENST00000528572 1834 ntBASIC18.18■□□□□ 0.5
LIN7CQ9NUP9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LIN7CQ9NUP9 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LIN7CQ9NUP9 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.18■□□□□ 0.5
LIN7CQ9NUP9 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LIN7CQ9NUP9 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 MIR6724-1-201ENST00000616420 92 ntBASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 MIR6724-2-201ENST00000616483 92 ntBASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 MIR6724-4-201ENST00000617390 92 ntBASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 MIR6724-3-201ENST00000622482 92 ntBASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LIN7CQ9NUP9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
LIN7CQ9NUP9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms