Protein–RNA interactions for Protein: Q9NRJ4

TULP4, Tubby-related protein 4, humanhuman

Predictions only

Length 1,543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TULP4Q9NRJ4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC30.75■■■□□ 2.51
TULP4Q9NRJ4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC30.75■■■□□ 2.51
TULP4Q9NRJ4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
TULP4Q9NRJ4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC30.75■■■□□ 2.51
TULP4Q9NRJ4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
TULP4Q9NRJ4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC30.75■■■□□ 2.51
TULP4Q9NRJ4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC30.75■■■□□ 2.51
TULP4Q9NRJ4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TULP4Q9NRJ4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TULP4Q9NRJ4 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TULP4Q9NRJ4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC30.74■■■□□ 2.51
TULP4Q9NRJ4 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC30.74■■■□□ 2.51
TULP4Q9NRJ4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC30.74■■■□□ 2.51
TULP4Q9NRJ4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TULP4Q9NRJ4 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
TULP4Q9NRJ4 AL353803.4-201ENST00000565882 1934 ntBASIC30.74■■■□□ 2.51
TULP4Q9NRJ4 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
TULP4Q9NRJ4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC30.73■■■□□ 2.51
TULP4Q9NRJ4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
TULP4Q9NRJ4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC30.73■■■□□ 2.51
TULP4Q9NRJ4 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
TULP4Q9NRJ4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC30.73■■■□□ 2.51
TULP4Q9NRJ4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC30.73■■■□□ 2.51
TULP4Q9NRJ4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC30.73■■■□□ 2.51
TULP4Q9NRJ4 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC30.72■■■□□ 2.51
TULP4Q9NRJ4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC30.72■■■□□ 2.51
TULP4Q9NRJ4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC30.72■■■□□ 2.51
TULP4Q9NRJ4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
TULP4Q9NRJ4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC30.71■■■□□ 2.51
TULP4Q9NRJ4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC30.71■■■□□ 2.51
TULP4Q9NRJ4 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
TULP4Q9NRJ4 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC30.71■■■□□ 2.51
TULP4Q9NRJ4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC30.71■■■□□ 2.51
TULP4Q9NRJ4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC30.71■■■□□ 2.51
TULP4Q9NRJ4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC30.71■■■□□ 2.51
TULP4Q9NRJ4 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC30.71■■■□□ 2.51
TULP4Q9NRJ4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC30.7■■■□□ 2.51
TULP4Q9NRJ4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC30.7■■■□□ 2.51
TULP4Q9NRJ4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
TULP4Q9NRJ4 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC30.7■■■□□ 2.51
TULP4Q9NRJ4 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
TULP4Q9NRJ4 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC30.7■■■□□ 2.5
TULP4Q9NRJ4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
TULP4Q9NRJ4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC30.69■■■□□ 2.5
TULP4Q9NRJ4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
TULP4Q9NRJ4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
TULP4Q9NRJ4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC30.69■■■□□ 2.5
TULP4Q9NRJ4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC30.69■■■□□ 2.5
TULP4Q9NRJ4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
TULP4Q9NRJ4 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
TULP4Q9NRJ4 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TULP4Q9NRJ4 HLA-L-209ENST00000420110 1011 ntBASIC30.68■■■□□ 2.5
TULP4Q9NRJ4 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC30.68■■■□□ 2.5
TULP4Q9NRJ4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC30.68■■■□□ 2.5
TULP4Q9NRJ4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
TULP4Q9NRJ4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
TULP4Q9NRJ4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC30.67■■■□□ 2.5
TULP4Q9NRJ4 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC30.67■■■□□ 2.5
TULP4Q9NRJ4 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC30.67■■■□□ 2.5
TULP4Q9NRJ4 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC30.67■■■□□ 2.5
TULP4Q9NRJ4 EI24-211ENST00000534546 1544 ntTSL 2 BASIC30.67■■■□□ 2.5
TULP4Q9NRJ4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC30.66■■■□□ 2.5
TULP4Q9NRJ4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC30.66■■■□□ 2.5
TULP4Q9NRJ4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC30.66■■■□□ 2.5
TULP4Q9NRJ4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC30.66■■■□□ 2.5
TULP4Q9NRJ4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC30.66■■■□□ 2.5
TULP4Q9NRJ4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC30.66■■■□□ 2.5
TULP4Q9NRJ4 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
TULP4Q9NRJ4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
TULP4Q9NRJ4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
TULP4Q9NRJ4 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC30.65■■■□□ 2.5
TULP4Q9NRJ4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
TULP4Q9NRJ4 AC073111.5-205ENST00000641717 521 ntBASIC30.65■■■□□ 2.5
TULP4Q9NRJ4 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
TULP4Q9NRJ4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC30.65■■■□□ 2.5
TULP4Q9NRJ4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
TULP4Q9NRJ4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TULP4Q9NRJ4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC30.64■■■□□ 2.5
TULP4Q9NRJ4 DBI-210ENST00000542275 757 ntTSL 5 BASIC30.64■■■□□ 2.5
TULP4Q9NRJ4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC30.64■■■□□ 2.5
TULP4Q9NRJ4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC30.64■■■□□ 2.5
TULP4Q9NRJ4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.5
TULP4Q9NRJ4 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
TULP4Q9NRJ4 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
TULP4Q9NRJ4 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC30.64■■■□□ 2.5
TULP4Q9NRJ4 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
TULP4Q9NRJ4 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
TULP4Q9NRJ4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.49
TULP4Q9NRJ4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC30.64■■■□□ 2.49
TULP4Q9NRJ4 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TULP4Q9NRJ4 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
TULP4Q9NRJ4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC30.63■■■□□ 2.49
TULP4Q9NRJ4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC30.63■■■□□ 2.49
TULP4Q9NRJ4 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TULP4Q9NRJ4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TULP4Q9NRJ4 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TULP4Q9NRJ4 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
TULP4Q9NRJ4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
TULP4Q9NRJ4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
TULP4Q9NRJ4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms