Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.75■□□□□ 0.75
KIAA1549Q9HCM3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.75■□□□□ 0.75
KIAA1549Q9HCM3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.75■□□□□ 0.75
KIAA1549Q9HCM3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.75■□□□□ 0.75
KIAA1549Q9HCM3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
KIAA1549Q9HCM3 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 MIR572-201ENST00000384983 95 ntBASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 AL162430.1-201ENST00000480705 870 ntBASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
KIAA1549Q9HCM3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.73■□□□□ 0.75
KIAA1549Q9HCM3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KIAA1549Q9HCM3 C9orf163-202ENST00000624034 2573 ntBASIC19.73■□□□□ 0.75
KIAA1549Q9HCM3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.73■□□□□ 0.75
KIAA1549Q9HCM3 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KIAA1549Q9HCM3 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KIAA1549Q9HCM3 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KIAA1549Q9HCM3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
KIAA1549Q9HCM3 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
KIAA1549Q9HCM3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.72■□□□□ 0.75
KIAA1549Q9HCM3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.72■□□□□ 0.75
KIAA1549Q9HCM3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KIAA1549Q9HCM3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
KIAA1549Q9HCM3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KIAA1549Q9HCM3 AC092666.2-201ENST00000613287 246 ntBASIC19.72■□□□□ 0.75
KIAA1549Q9HCM3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KIAA1549Q9HCM3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KIAA1549Q9HCM3 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KIAA1549Q9HCM3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KIAA1549Q9HCM3 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.72■□□□□ 0.75
KIAA1549Q9HCM3 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KIAA1549Q9HCM3 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KIAA1549Q9HCM3 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.72■□□□□ 0.75
KIAA1549Q9HCM3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.72■□□□□ 0.75
KIAA1549Q9HCM3 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.72■□□□□ 0.75
KIAA1549Q9HCM3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 DUX4L2-201ENST00000561772 1275 ntBASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 DUX4L6-201ENST00000626483 1275 ntBASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 DUX4L1-201ENST00000627662 1275 ntBASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 DUX4L8-201ENST00000629013 1275 ntBASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 DUX4L3-201ENST00000630187 1275 ntBASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 DUX4L7-201ENST00000630678 1275 ntBASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 DUX4L5-201ENST00000630834 1275 ntBASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KIAA1549Q9HCM3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.7■□□□□ 0.74
KIAA1549Q9HCM3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KIAA1549Q9HCM3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
KIAA1549Q9HCM3 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.7■□□□□ 0.74
KIAA1549Q9HCM3 MIR6084-201ENST00000622012 110 ntBASIC19.7■□□□□ 0.74
KIAA1549Q9HCM3 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
KIAA1549Q9HCM3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KIAA1549Q9HCM3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
KIAA1549Q9HCM3 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
KIAA1549Q9HCM3 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KIAA1549Q9HCM3 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KIAA1549Q9HCM3 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KIAA1549Q9HCM3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.7■□□□□ 0.74
KIAA1549Q9HCM3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.7■□□□□ 0.74
KIAA1549Q9HCM3 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
KIAA1549Q9HCM3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
KIAA1549Q9HCM3 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KIAA1549Q9HCM3 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
KIAA1549Q9HCM3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KIAA1549Q9HCM3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
KIAA1549Q9HCM3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KIAA1549Q9HCM3 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.69■□□□□ 0.74
KIAA1549Q9HCM3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.69■□□□□ 0.74
KIAA1549Q9HCM3 AC087239.1-201ENST00000622671 572 ntBASIC19.69■□□□□ 0.74
KIAA1549Q9HCM3 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
KIAA1549Q9HCM3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
KIAA1549Q9HCM3 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.69■□□□□ 0.74
KIAA1549Q9HCM3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.69■□□□□ 0.74
KIAA1549Q9HCM3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.68■□□□□ 0.74
KIAA1549Q9HCM3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
KIAA1549Q9HCM3 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms