Protein–RNA interactions for Protein: Q9HCH3

CPNE5, Copine-5, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE5Q9HCH3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE5Q9HCH3 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CPNE5Q9HCH3 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.15■□□□□ 0.98
CPNE5Q9HCH3 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.15■□□□□ 0.98
CPNE5Q9HCH3 AL022069.1-201ENST00000568025 1636 ntBASIC21.15■□□□□ 0.98
CPNE5Q9HCH3 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPNE5Q9HCH3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CPNE5Q9HCH3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.14■□□□□ 0.98
CPNE5Q9HCH3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE5Q9HCH3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC21.14■□□□□ 0.97
CPNE5Q9HCH3 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC21.14■□□□□ 0.97
CPNE5Q9HCH3 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE5Q9HCH3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE5Q9HCH3 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE5Q9HCH3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE5Q9HCH3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CPNE5Q9HCH3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CPNE5Q9HCH3 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.13■□□□□ 0.97
CPNE5Q9HCH3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.13■□□□□ 0.97
CPNE5Q9HCH3 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CPNE5Q9HCH3 HLA-L-211ENST00000482052 1765 ntBASIC21.13■□□□□ 0.97
CPNE5Q9HCH3 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.13■□□□□ 0.97
CPNE5Q9HCH3 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.13■□□□□ 0.97
CPNE5Q9HCH3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.13■□□□□ 0.97
CPNE5Q9HCH3 TERF1P2-201ENST00000583350 1212 ntBASIC21.13■□□□□ 0.97
CPNE5Q9HCH3 AC080038.1-201ENST00000611274 1154 ntBASIC21.13■□□□□ 0.97
CPNE5Q9HCH3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CPNE5Q9HCH3 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CPNE5Q9HCH3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.13■□□□□ 0.97
CPNE5Q9HCH3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.13■□□□□ 0.97
CPNE5Q9HCH3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.13■□□□□ 0.97
CPNE5Q9HCH3 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CPNE5Q9HCH3 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CPNE5Q9HCH3 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE5Q9HCH3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE5Q9HCH3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE5Q9HCH3 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE5Q9HCH3 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE5Q9HCH3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE5Q9HCH3 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.12■□□□□ 0.97
CPNE5Q9HCH3 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE5Q9HCH3 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.12■□□□□ 0.97
CPNE5Q9HCH3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
CPNE5Q9HCH3 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CPNE5Q9HCH3 LINC02228-203ENST00000641970 1355 ntBASIC21.11■□□□□ 0.97
CPNE5Q9HCH3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE5Q9HCH3 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE5Q9HCH3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE5Q9HCH3 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE5Q9HCH3 ABHD17AP1-201ENST00000358206 933 ntBASIC21.11■□□□□ 0.97
CPNE5Q9HCH3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.11■□□□□ 0.97
CPNE5Q9HCH3 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC21.11■□□□□ 0.97
CPNE5Q9HCH3 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.11■□□□□ 0.97
CPNE5Q9HCH3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE5Q9HCH3 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.11■□□□□ 0.97
CPNE5Q9HCH3 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE5Q9HCH3 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE5Q9HCH3 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE5Q9HCH3 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE5Q9HCH3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE5Q9HCH3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CPNE5Q9HCH3 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.1■□□□□ 0.97
CPNE5Q9HCH3 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE5Q9HCH3 LINC01124-201ENST00000409786 2117 ntBASIC21.1■□□□□ 0.97
CPNE5Q9HCH3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE5Q9HCH3 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
CPNE5Q9HCH3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE5Q9HCH3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE5Q9HCH3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
CPNE5Q9HCH3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.1■□□□□ 0.97
CPNE5Q9HCH3 AL161729.1-201ENST00000604104 1402 ntBASIC21.1■□□□□ 0.97
CPNE5Q9HCH3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CPNE5Q9HCH3 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE5Q9HCH3 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE5Q9HCH3 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE5Q9HCH3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
CPNE5Q9HCH3 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CPNE5Q9HCH3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE5Q9HCH3 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE5Q9HCH3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE5Q9HCH3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC21.09■□□□□ 0.97
CPNE5Q9HCH3 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.09■□□□□ 0.97
CPNE5Q9HCH3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE5Q9HCH3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE5Q9HCH3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CPNE5Q9HCH3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
CPNE5Q9HCH3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE5Q9HCH3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC21.08■□□□□ 0.97
CPNE5Q9HCH3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.08■□□□□ 0.97
CPNE5Q9HCH3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.08■□□□□ 0.97
CPNE5Q9HCH3 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.08■□□□□ 0.97
CPNE5Q9HCH3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE5Q9HCH3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CPNE5Q9HCH3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.08■□□□□ 0.97
CPNE5Q9HCH3 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.08■□□□□ 0.97
CPNE5Q9HCH3 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CPNE5Q9HCH3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
CPNE5Q9HCH3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CPNE5Q9HCH3 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
CPNE5Q9HCH3 AL117328.2-201ENST00000624617 1940 ntBASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms